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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73985931
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAARRLGV NSLSSLASPH PGGAWPRIPG VEAVARQLLD RYLCSDRNPA LAAAELCTEA  60
   61 PWQPDVSADA GSVRVVAEMK SAALSRDTTG RSWRAPRGLV LPRLVSSRPA TPAQSRRPGK 120
  121 MVEDGAEELE DLVHFSVSEL PSRGYGVMEE IRRQGKLCDV TLKIGDHKFS AHRIVLAASI 180
  181 PYFHAMFTND MMECKQDEIV MQGMDPSALE ALINFAYNGH LAIDQQNVQS LLMGASFLQL 240
  241 QSIKDACCTF LRERLHPKNC LGVRQFAETM MCAVLYDAAN SFIHQHFVDV SMSEEFLALP 300
  301 LEDVLELVSR DELNVKSEEQ VFEAALAWVR YDREQRGPCL PELLSNIRLP LCRPQFLSDR 360
  361 VQQDDLVRCC HKCRDLVDEA KDYHLMPERR PHLPAFRTRP RCCTSITGLI YAVGGLNSAG 420
  421 DSLNVVEVFD PIANRWEKCH PMTTARSRVG VAVVNGLLYA IGGYDGQLRL STVEVYNPEM 480
  481 DTWTRVRSMN SKRSAMGTVV LDGQIYVCGG YDGNSSLNSV ETYSPETDKW TVVTPMSSSR 540
  541 SAAGVTVFEG RIYVSGGHDG LQIFNSVEHY NHHTATWHPA ASMLNKRCRH GAASLGSKMF 600
  601 VCGGYDGSGF LSIAEVYSSV ADQWCLIVPM LTRRSRVSLV ASCGRLYAVG GYDGQSNLSS 660
  661 VEMYDPETDR WTFMAPMACH EGGVGVGCIP LLTI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle