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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73985503
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKALILVGGY GTRLRPLTLS IPKPLVDFCN KPILLHQVEA LAAAGVDHVI LAVSYMSQML  60
   61 EKEMKAQEQR LGIRISMSHE EEPLGTAGPL ALARDLLSET ADPFFVLNSD VICDFPFQAM 120
  121 VQFHRHHGQE GSILVTKVEE PSKYGVVVCE ADTGRIHRFV EKPQVFVSNK INAGMYILNP 180
  181 TVLRRIQLQP TSIEKEIFPV MAKEGQLYAM ELQGFWMDIG QPKDFLTGMC LFLQSLRQKQ 240
  241 PEQLCSGPGI VGNVLVDPSA RIGQNCSIGP NVSLGPGVVV EDGVCIRRCT VLRDAHIRSH 300
  301 SWLESCIVGW RCRVGQWVRM ENVTVLGEDV IVNDELYLNG ASVLPHKSIG ESVPEPRIIM 360
  361 SSSLVVTTMA WLVLLGALLC MSRVGVGSLG TEGFLPSMPH NCPYKCVCAA DLLSCAGLGL 420
  421 QDVPAALPAA AADLDLSHNA LQRLRPGWLA PLSRLRALRL GHNELDVLGR GVFTNASALR 480
  481 LLDLSSNALR ALGRHDLDGL GALERLLLFN NRLAHLDVHA FRGLGALSRL YLGCNELSSF 540
  541 SFDHLHGLGT THLRTLDLSS NRVGRIPVAH LAALPAFLKN GLYLHNNPLP CDCRLYHVLR 600
  601 RWQQRGLSAV SDFAREYMCL AFKVLASRVR FFEHSRIFQN CSTALARGLE RPEEQLHVQM 660
  661 GRSLTLRCNT SAPAVRVAWV SPQHELLVAP GSQDGSISVL ADGSLAISNV QPQHEGVFVC 720
  721 LASGPRLHHN QTHEYNVSVH FPHPEPEAFN TGFTTLLGCA VGLVLVLLYL FAPPCPGCRR 780
  781 CYRRTCRCRC WPRAPSPLRE LSAQSSVLST TPPDVPSRKA SVHKHVVFLE PGRRGLNGRV 840
  841 QLAVAEDFDL YNPVGLQLKA GSESASSTGS EGLVMT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle