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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73984336
Protein type: Transmembrane
Type Confidence: 0.75
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQATPSEAEA GGQSPQSCVS EAHSDWTAGK PVSLLAPLVP PRSAGQPLTF GPGGRQPLRS  60
   61 LLVGMCSGSG RRRSSLSPTM RPGTGAERGG LMMGHPGMHY APMGMHPMGQ RANMPPVPHG 120
  121 MMPQMMPPMG GPPMGQMPGM MSSVMPGMMM SHMSQASMQP ALPPGVNNMD VAAGTASGAK 180
  181 SMWTEHKSPD GRTYYYNTET KQSTWEKPDD LKTPAEQLLS KCPWKEYKSD SGKPYYYNSQ 240
  241 TKESRWAKPK ELEDLEGYQN TIVAGSLITK SNLHAMIKAE ESSKQEECTT TSTAPVPTTE 300
  301 IPTTMSTMAA AEAAAAVVAA AAAAAAAAAA ANASASTSAS NTVGGTGPVV PEPEVTSIVA 360
  361 TVVDNENTMT ISTEEQAQLT STPAVQDQSM EVSSNTGEEA AKQETVSDFT PKKEEEESQP 420
  421 AKKTYTWNTK EEAKQAFKEL LKEKRVPSNA SWEQAMKMII NDPRYSALAK LSEKKQAFNA 480
  481 YKVQTEKEEK EEARSKYKEA KESFQRFLEN HEKMTSTTRY KKAEQMFGEM EVWNAISERD 540
  541 RLEIYEDVLF FLSKKEKEQA KQLRKRNWEA LKNILDNMAN VTYSTTWSEA QQYLMDNPTF 600
  601 AEDEELQNMD KEDALICFEE HIRALEKEEE EEKQKSLLRE RRRQRKNRES FQIFLDELHE 660
  661 HGQLHSMSSW MELYPTISSD IRFTNMLGQP GSTALDLFKF YVEDLKARYH DEKKIIKDIL 720
  721 KDKGFVVEVN TTFEDFVAII SSTKRSTTLD AGNIKLAFNS LLEKAEARER EREKEEARKM 780
  781 KRKESAFKSM LKQATPPIEL DAVWEDIRER FVKEPAFEDI TLESERKRIF KDFMHVLEHE 840
  841 CQHHHSKNKK HSKKSKKHHR KRSRSRSGSD SDDDDSHSKK KRQRSESRSA SEHSSSAESE 900
  901 RSYKKSKKHK KKSKKRRHKS DSPESDAERE KDKKEKDRES EKDRTRQRSE SKHKSPKKKT 960
  961 GKDSGNWDTS GSELSEGELE KRRRTLLEQL DDDQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle