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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73984095
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSKKSRKRL NRSAENGSAS PTCASSPSGP SLPPAGPGTA AAAGILVVTN FLEMDDKVPK  60
   61 TFQNFLVQLG LNTMKSANIC IGRPVLLTSL DGKQEVYTAW PVAGFPGGKV GLSEMAQKNV 120
  121 GVKVGDAIQV QPLLGAVLQA EEMDLALSDK NVDINEEQLT GCLLRKLDGK IVLPGNFLYC 180
  181 TFYGRPCKLQ VLQVKGTDGM ILRRPQNDSD TNAQGMAYEQ SSMETSTLDV SLQLSQLDLG 240
  241 EPQDPPSSST PCKPVDDRMI NKDSDILLDV TQNHGDSSGL GLVEVTELKC SFESARGGNE 300
  301 QLINEERLLK SACVGAKCNT DIFYFISSTT RINFIKVHTN SEEEDNQFKV TYDMIGGLSS 360
  361 QLKAIREIIE LPLKQPELFK SYGIPPPRGV LLYGPPGTGK TMIARAVANE VGAYVSVING 420
  421 PEIISKFYGE TEARLRQIFA EATLRHPSII FIDELDALCP KREGAQNEVE KRVVASLLTL 480
  481 MDGIGSEGSE GQVLVLGATN RPHALDAALR RPGRFDKEIE IGVPNAADRL DILQKLLQRV 540
  541 PHLLTEVELL QLANSAHGYV GADLKALCNE AGLYALRRVL NKQPNLSDSK MAGLVKITLN 600
  601 DFLQGMNDIR PSAMREVAID VPNVSWSDIG GLENIKLKLK QAVEWPLKHP ESFIRMGIQP 660
  661 PKGVLLYGPP GCSKTMIAKA LANESGLNFL AIKGPELMNK YVGESERAVR EIFRKARAVS 720
  721 PSIIFFDELD ALAIERGSSS GAGNVADRVL AQLLTEMDGI EQLKDVTILA ATNRPDRIDK 780
  781 ALMRPGRIDR IIYVPLPDAA TRREILNLQF HSMPISNDVN LDELIFQTDT YSGAEIIAVC 840
  841 REAALLALEE DIQANSITRR HFTRALSTVT PRISKSLRRF YEEYQEKSGL HTL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle