YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57100531
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAGDGDVKL GTLGSGSESS SDGSSESPSG VGAAAEGGGW AAAALALLTG GGEMLLNVAL  60
   61 VALVLLGAYR LWVRWGRRGL GTGAGAGEES PAASLPRMKK RDFSLEQLRQ YDGSRTPRIL 120
  121 LAVNGKVFDV TKGSKFYGPA GPYGIFAGRD ASRGLATFCL DKDALKDEYD DLSDLNAVQM 180
  181 ESVREWEMQF KEKYDYVGRL LKPGEEPSEY TDEEDTKDHN KQD

Type	Start	End	Confidence
Non-Cytoplasmic	1	39	0.62
Transmembrane Helix	40	73	0.77
Cytoplasmic	74	223	0.95