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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73983942
Protein type: Transmembrane
Type Confidence: 0.79
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVVIHVRDF NDNPPSFPPG DIFKSIVENI PIGTSVISVT AHDPDADING QLSYAIVQQM  60
   61 PRGNHFGIDE VKGTIYTNAE IDREFANLFE LTVKANDQAV PIETRRYALK NVTILVTDLN 120
  121 DNVPMFISQN ALAADPAAVI GSVLTTIMAA DPDEGANGEV EYEIINGDTD TFIVDRYSGD 180
  181 LRVASALVPS QLIYNLIVSA TDLGPERRKS TTELTIILQG LDGPVFTQPK YITILKEGEP 240
  241 IGTNVISIEA ASPRGSEAPV EYYIVSVRCE EKTVGRLFTI GRQTGVIQTA AILDREQGAC 300
  301 LYLVDVYAIE KSTAFPRTQR AEVEITLQDI NDNPPVFPTD MLDLTVEENI GDGSKIMQLT 360
  361 AMDADEGANA LVTYTIISGA DDSFRIDPES GDLIATKRLD RERRSKYSLL VRADDGLQSS 420
  421 DMRINITVSD VNDHTPKFSR PVYSFDIPED TTPGSLVAAI LATDDDSGVN GEITYIVNED 480
  481 DEDGIFFLNP VTGVFNLTRV LDYEAQQYYI LTVRAEDGGG QFTTIRVYFN VLDVNDNPPI 540
  541 FSLNSYSTSL MENLPLGSTV LVFNVTDADD GINSQLAFSI ASGDSLSQFT VDKNGVLKVL 600
  601 KSLDRESQSF YNLVVQVHDL PQLPASRFTS TAHVSIILLD VNDNPPAFLS PKLTYIPENT 660
  661 PIDTIVFKAQ ATDPDSGPNS YIEYTLLNPL GNKFSIGTID GEVRLTGELD REEVSNYTLT 720
  721 VVATDKGQPA LSSSTEVVVM VLDINDNNPV FMQALYKVEI NENTLTGTDI IQVYAADGDE 780
  781 GTNGQVRYGI IDGNANQEFR IDSVTGAITV AKPLDREKTP TYSLTVQATD RGSTPRTDTT 840
  841 TVNIVLLDIN DFVPMFELSP YSVNVPENLG TLPRTILQVV ARDDDQGSNS KLSYVLFGGN 900
  901 EDNAFTLSAS GELRVIQSLD RETKAHFVLM VTATDSGSPA LTGTGTINVI IDDVNDNVPT 960
  961 FASKMYFTTI PEDAPTGTDV LLVNASDADA STNAVIRIIG GNSQFTINPS TGQIITSALL1020
 1021 DRETKENYTL VVVSSDAGSP EPLSSSTSVL VTVTDVNDNP PRFQHHPYVT HIPSPTPPGS1080
 1081 FVFAVTVTDA DIGPNSELHY SLSGRNSEKF HIDPLRGAIM AAGPLNGASE VTFSVHVKDG1140
 1141 GSFPKTDSTT VTVRFVNKAD FPKVRAKEQT FMFPENQPVG TLVTTITGSS LRGEPLSYYI1200
 1201 ASGNLGSTFQ IDQLTGQVSI SQPLDFEKIQ KYVIWIEARD GGFPPLSSYE KLDLTVLDVN1260
 1261 DNSPVFREDP FVSEILENLS PRKILTVSAM DKDSGPNGQL DYEIVNGNKE HSFTINHATG1320
 1321 EIRSIRPLDR EKVSQYVLTI KSSDKGSPSQ STSVKVIINI LDENDNAPRF SQIFSAYVPE1380
 1381 NSPLGYTVTR VTTSDEDIDI NAISRYSIMD TSLPFTINPS TGDIVISRPL NREDTDRYRI1440
 1441 RVSAHDSGWT VSTDVTIFVT DVNDNAPRFS RPSYYLDCPE LTEIGSKVTQ VSATDPDEGS1500
 1501 NGQVFYFIKS QSEYFRINAT TGEIFNKQVL KYQNVSGFSN VNINRHSFIV TSSDRGNPSL1560
 1561 LSETTVTINT VDSNDNAPQF LKTKYFTPVT KNVKVGTKLI KVTAVDDRDF GLNSEVEYLI1620
 1621 SNENHFGKFK LDNGTGWISV ASSLISDLNQ NFLITVTARD KGNPPLSSQA TVQIIVTEEN1680
 1681 YHTPEFSQSH MSATIPESHS IGAIVRTVSA RDRDAAMNGL IRYSISSGNE EGIFAINSST1740
 1741 GILTLAKALD YELCQKHEMT ISATDGGWVA RTGYCSVTVN VIDVNDNSPV FFPDEYFPTV1800
 1801 LENAPSGTTV IHLNATDADS GTNAVIAYTV QSSDSDLFVI DPNTGVITTQ GFLDFETKQS1860
 1861 YHLTVKAFNV PDEERCSFAT INIQLKGTNE YVPRFVSKLY YFEISEAAPK GTIVGEVFAS1920
 1921 DRDLGADGEV HYLIFGNSRK KGFQINKKTG QIYVSGLLDR EKEERVSLKV LAKNFGSIRG1980
 1981 ADIDEVTVNV TVLDANDPPI FSLNIYSVQI SEGVPTGTHV TFVSAFDSDS VPSWSRFSYF2040
 2041 IGSGNENGAF SINPQTGQIT VTAELDRETL PIYNLTVLAV DSGTPSATGS ASLLVTLEDI2100
 2101 NDNGPMLTVS EGEVMENKRP GTLVMTLQST DPDLPPNQGP FTYYLLSTGP ATNYFSLNTA2160
 2161 GVLSTTREID REQIADFYLS VITRDSGVPQ MSSTGTVHIT VIDQNDNPSQ SRTVEIFVNY2220
 2221 YGNLFPGGIL GSVKPQDPDV LDTFHCSLTS GVTSLFSIPR GTCDLNSQPR STDGTFDLTV2280
 2281 LSNDGVHSTV TSNIRVFFAG FSNATVDNSI LLRLSVPTVK DFLTNHYLHF LRIASSQLTG2340
 2341 LGTAVQLYGA YEENNKTFLL AAVKRNNNQY VNPSGVATFF ESIKEILLRQ SGVKVESVDH2400
 2401 DSCIHGPCQN GGSCIRRLAV SSVLKSHESL PVITVANEPL QPFLCKCLPG YAGSWCEIDI2460
 2461 DECLPSPCHN GGTCHNLVGG FSCSCPDGFT GRACERDINE CLPGPCKNGA VCQNVPGSFN2520
 2521 CVCKTGYTGK MCESSVNYCE CNPCFNGGSC QSGVESYYCH CPFGVFGKHC ELNSYGFEEL2580
 2581 SYMEFPSLDP NNNYIYVKFA TIKSHALLLY NYDNQTGDRA EFLALEIAEE RLRFSYNLGS2640
 2641 GTYKLTTMKK VSDGHFHTVI ARRAGMAASL TVDSCSENQE PGYCTVSNVA VSDDWTLDVQ2700
 2701 PNRVTVGGIR SLEPILQRRG HVESHDFVGC IMEFAVNGRP LEPSQALAAQ GILDQCPRLE2760
 2761 GACTHSPCQH GGTCTDYWSW QQCHCKEGLT GKYCEKSITP DTALSLEGKG RLDYHMSQNE2820
 2821 KREYLLKQSI RGAMLEPFGV NSLEIKFRTR SENGILIHIQ ESSNYTTVKI KNGKVHFTSD2880
 2881 AGIAGKVERN IPEVYVADGH WHTFLIGKNG TATVLSIDRL YNRDIIHPTQ DFGGLDVLTI2940
 2941 SLGGIPPNQA HRDSQTGFDG CIASMLYGGE SLPFSGKHSL ASISKTDPSV KIGCRGPNIC3000
 3001 ASNPCWGDLL CINQWYAYKC VPPGDCASHP CQNGGSCEPG LHAGFTCSCP ESHTGRTCET3060
 3061 VVACLGVLCP QGRVCKAGSP GGHVCVLSQG PEEISLPLWA VPAIVGSCAT VLALLVLSLI3120
 3121 LCNQCRGKKT KNPKEEKKPK EKKKKGSENV AFDDPDNIPP YGDDMTVRKQ PEGNPKPDII3180
 3181 ERENPYLIYD ETDIPHSSET IPSAPLASPE QEIEHYDIDN ASSIAPSDAD IIQHYKQFRS3240
 3241 HTPKFSIQRH SPLGFARQSP MPLGASSLTY QPSYSQGLRT SSLSHSAGPT PNPLSRHSPA3300
 3301 PFSKSSTFYR NSPARELHLP IRDGNTLEMH GDACQPGIFN YATRLGRRSK SPQAMTSHGS3360
 3361 RPGSRLKQPI GQIPLESSPP VGLSIEEVER LNTPRPRNPS ICSADHGRSS SEEDCRRPLS3420
 3421 RTRNPADGIP APESSSDSDS HESFTCSEME YDREKPMVYT SRMPKLSQVN ESDADDEDNY3480
 3481 GARLKPRRYH GRRAEGGPVG TQAAAPGGAD NTLPLKLGQQ AGNFNWDNLL NWGPGFGHYV3540
 3541 DVFKDLASLP EKAAANEEGK SGTTKPVPKD GEAEQYV

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