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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73982171
Protein type: Transmembrane
Type Confidence: 0.59
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRKKVDNRI RILIENGVAE RQRSLFVVVG DRGKDQVVIL HHMLSKATVK ARPSVLWCYK  60
   61 KELGFSSHRK KRMRQLQKKI KNGTLNIKQD DPFELFVAAT NIRYCYYNET HKILGNTFGM 120
  121 CVLQDFEALT PNLLARTVET VEGGGLVVIL LRTMNSLKQL YTMTMDVHSR YRTEAHQDVV 180
  181 GRFNERFILS LASCKKCLVI DDQLSILPIS SHAASIEALP PQTPSLSPSD LELKELKESL 240
  241 QDTQPVGVLV DCCKTLDQAK AVLKFIEGIS EKTLRSTVAL TAARGRGKSA ALGLAIAGAV 300
  301 AFGYSNIFVT SPSPDNLHTL FEFVFKGFDA LQYQEHLDYE IIQSLNPEFN KAVIRVNVFR 360
  361 EHRQTIQYIH PADAVKLGQA ELVVIDEAAA IPLPLVKSLL GPYLVFMAST INGYEGTGRS 420
  421 LSLKLIQQLR QQTRTLHEVS LQESIRYAPG DAVEKWLNDL LCLDCLNITR IVSGCPLPEA 480
  481 CELYYVNRDT LFCYHKASEV FLQRLMALYV ASHYKNSPND LQMLSDAPAH HLFCLLPPVP 540
  541 PTQNALPEVL AVIQVCLEGE ISRQSILNSL SRGKKASGDL IPWTVSEQFQ DADFGGLSGG 600
  601 RVVRIAVHPD YQGMGYGSRA LQLLQMYFEG RFPCLEEKVL ETSQEIHTVS SEAVSLLEEV 660
  661 ITPRKDLPPL LLKLNERPAE RLDYLGVSYG LTPRLLKFWK RAGFVPVYLR QTPNDLTGEH 720
  721 SCIMLKTLME EDEADRGAWL PAFWKDFRRR FLALLSYQFS TFSPPLALNI IQNKNLGKPT 780
  781 QPALSREELD ALFLSYDLKR LEMYSRNMVD YHLIMDLIPA ISRLYFLNQL GDLSLSAAQS 840
  841 ALLLGIGLQH KSVDQLEKEI ELPSGQLMGL FNRIIRKVVK LFSEVQERAI EEQMVAVKDV 900
  901 VMEPTMKTLS DDLDEAAKEF QEKHEKEVGK LKNMDLSQYI IRGDDEEWNE VLNKAGQNAS 960
  961 IVSLKSDKKR KLEAKQPKEN KKLKKNRDMK NKKDLKLKRK K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle