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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73981404
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASASSGPSA AGVSSFDPGV PSCASASASG IKRSVGSEVP YASGMPIKKI GHRGVDSSGE  60
   61 TTYKKTTSSA LKGAIQLGIT HTVGSLSTKP ERDVLMQDFY VVESIFFPSE GSNLTPAHHY 120
  121 NDFRFKTYAP VAFRYFRELF GIRPDDYLYS LCNEPLIELC SSGASGSLFY VSSDDEFIIK 180
  181 TVQHKEAEFL QKLLPGYYMN LNQNPRTLLP KFYGLYCVQA GGKNIRIVVM NNLLPRSVKM 240
  241 HIKYDLKGST YKRRASQKER EKPLPTFKDL DFLQDIPDGL FLDADMYNAL CKTLQRDCLV 300
  301 LQSFKIMDYS LLMSIHNIDH AQREPLGNEA QCSADTRKPA PQKALYSTAM ESIQGEARRG 360
  361 GTMETDDHMG GIPARNSKGE RLLLYIGIID ILQSYRFVKK LEHSWKALVH DGDTVSVHRP 420
  421 GFYAERFQRF MCNTVFKKIP LKPSPSKKFR SGSSFSRRAG PSGNSCITYQ TSVSGEHKAQ 480
  481 VTTKAEVEPG VHFGRPDVLP QTPPLEKISE VSTIPDPYFS PVVGETLPMQ TTSVDNSEYM 540
  541 RNGDFLPTRL QAQQDAVNIV CHSKTRSNPE NNVGLITLAN DCEVLTTLTP DTGRILSKLH 600
  601 TVQPKGKITF CTGIRVAHLA LKHRQGKNHK MRIIAFVGSP VEDNEKDLVK LAKRLKKEKV 660
  661 NVDIINFGEE EVNTEKLTAF VNTLNGKDGT GSHLVTVPPG PSLADALISS PILAGEGGAM 720
  721 LGLGASDFEF GVDPSADPEL ALALRVSMEE QRQRQEEEAR RAAAASAAEA GIATAGAEDS 780
  781 DDALLKMTIS QQEFGRSGLP DLSSMTEEEQ IAYAMQMSLQ GAEFGQAESA DIDASSAMDT 840
  841 SEPAKEEDDY DVMQDPEFLQ SVLENLPGVD PNNEAIRNAM GSLASQANKD GKKDKKEEDK 900
  901 K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle