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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73981135
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTPALLPLS GRRIPPLNLG PPSFPHHRAT LRLSEKFILL LILSAFITLC FGAFFFLPDS  60
   61 SKHKRFDLGL EDVLIPHVDA SKGAKNPGVF LIHGPDEHRH RFVYFRSLGF SIWQSENGEE 120
  121 EERLRNKIRA DHEKALEEAK EKLKKSREEI RAEIQTEKNK VVQEMKTKEK KPLPPVPIPN 180
  181 LIGINGGDPE DNDIRKKREK IKEMMKHAWD NYRMYGWGHN ELRPIAKKGH STNIFGNSQM 240
  241 GATIVDALDT LYIMGLHDEF GDGQKWIEEN LDFSVNSEVS VFEVNIRFIG GLLAAYYLSG 300
  301 EEIFKIKAVQ LAEKLLPAFN TPTGIPWAMV NLKSGVGRNW GWASAGSSIL AEFGTLHMEF 360
  361 VHLSYLTGDP VYYKKVMHIR KLLQKMDRPN GLYPNYLNPR TGRWGQYHTS VGGLGDSFYE 420
  421 YLLKAWLMSD KTDHEARKMY DDAIEAIEKH LIKKSRGGLT FIGEWKNGHL EKKMGHLACF 480
  481 AGGMFALGAD GSRMDKAGHY LELGAEIART CHESYDRTAL KLGPESFKFD GAVEAVAVRQ 540
  541 AEKYYILRPE VIETYWYLWR FTHDPRYRQW GWEAALAIEK YCRVSGGFSG VKDVYSSTPT 600
  601 HDDVQQSFFL AETLKYLYLL FSSDDLLPLD HWVFNTEAHP LPVLHLANTT LSGNPAVR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle