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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73980965
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARGERRRRG APVDGARTAE RAARGGPARR GGEARGFAWR AALGVVVLSL ALGLSGCWLL  60
   61 EWRRARRAVT LHSAPPSLPP DSSSPAVAPD LFWGTYRPHV YFGMKTRSPK PLLTGLMWAQ 120
  121 QGATPGTPKL RHTCEQGDGV GPYGWEFHDG LSFGRQHIQD GALKLTTEFV KRPGGQHGGD 180
  181 WSWRVTVEPQ ASGTSALPLV SLFFYVVTDG KEVLVPEVGA KGQLKFISGH SSELGDFRFT 240
  241 LMAPTNPGDL APKYSSYNVF WSSNPGLPLL TEMVKSRLNS WFQHRPPGAS PERYLGLPGS 300
  301 LKWEDKGPSG QGQGQGQFLI QQVTLKTPFS VELVFESGSA RAGRSQALEQ LSGSLLTQAL 360
  361 ESHAEAFREH FEKTFQLKEK GLSLEEQALG QVALSGLLGG IGYFYGQGLV LADMGVEGSE 420
  421 QKVDPALFPP VPLFTAVPSR SFFPRGFLWD EGFHQLVVQR WDPRLTREVL GHWLGLLNAD 480
  481 GWIGREQVLG DEARARVPPE FLVQKAAHAN PPTLLLPVAH MLEVGDPADF AFLRRAFPRL 540
  541 CAWFSWLHKS QAGPVPLSYR WRGRDPVLPT LLNPKTLPSG LDDYPRASHP SVSERHLDLR 600
  601 CWMALGARVL LRLAEQLGEA EAAAELGPLA ASLEAEENLD ELHWAPELGV FADFGNHTKA 660
  661 VQLKPRPPQG LVRVVGRPHP RLQYVDALGY VSLFPLLLRL LDPNSPRLGP LLDVLADSRH 720
  721 LWSPFGLRSL AASSPFYGQR NSEHDPPYWR GAVWLNVNYL ALGALYHYGH LEGPHQAQAA 780
  781 KLHRELRTNV VGNVWRQYQA TGFLWEQYSD RDGRGMGCRP FQGWTSLVLL AMAEDY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle