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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73980820
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNFYEERAT MIAAGDLQEF VPFGRDHCKH HPNALNLQLR QLQPASELWS SDGAAGLVGS  60
   61 LQEVTIHEKQ KESWQLRKGV SEIGEEVDYD EELYVAGNMV IWSKGSKSQA LAVYKAFTVD 120
  121 SPVQQALWCD FIISQDKSEK AYSSNEVEKC ICILQSSCIN MHSVEGKDYI ASLPFQVANV 180
  181 WPTKYGLLFE RSSSTHEVPP GPPREPLPTM FSMLHPLDEI TPLVCKSGSL FGSSRVQYVV 240
  241 DHAMKIVFLN TEPSIIMTYD TVQSLHSVWA LRRVKTEEEN VVLKFSEQGG TPQNVASSSS 300
  301 LTAHLRSLSK GDSPVASPFQ NYSSIHSQSR STSSPSLHSR SPSISNMAAL SRAHSPALGV 360
  361 HSFSGVQRFN LSSHNQSPKR HSISHSPNSS NGSFLAPETE PIVPELCIDH LWTETITNIR 420
  421 EKNSQASKVF ITSDLCGQKF LCFLVESELQ LRCVKFQESN DKTQLIFGSI TNIHAKDAAP 480
  481 VEKIDTMLVL EGSGNLVLYT GVVRVGKVFI PGLPAPSLTM SNTMPRPSTP LDSVSTPKPL 540
  541 SKLLGSLDEV VLFSPVPELR DSSKLHDSLY NEDCTFQQLG TYIHSIRDPV CNRVTLELSN 600
  601 GSMVRITIPE IATSELVQTC LQAIKFILPK EIAVQMLVKW YSVHSAPGGP SYHSEWNLFV 660
  661 TCLMNMMGYN TDRLAWTRNF DFEGSLSPVI APKKARPSET GSDDDWEYLL NSDYHQNVES 720
  721 HLLNRSLCLS PLEVSQMKDE DFSQNLILDS STLLFTHIPA IFFVLHLIYE ELKLNTLMGE 780
  781 GIRSLVGLLV QLARDLKLEP YVDHYYRDFP TLVRTTGQVC TIDQGQTGFM HHPSFFTPEP 840
  841 PSIYQWVSSC LKGEGMPPYP YLPGICERSR LVVLSIALYI LGNESSVSEE SSQYLSRITI 900
  901 APQKSQAEQE ENRFSFRHST SVSSLAERLV VWMTNVGFTL RDLETLPFGI ALPIRDAIYH 960
  961 CREQPASDWP EAVCLLIGRQ DLSKQACEGN LPKGKSVLSS DVPSGTETEE EDDGMNDMNQ1020
 1021 EVMSLIWSED LRVQDVRRLL QSAHPVRVNV VQYPELSDHE FIEEKENRLL QLCQRTMALP1080
 1081 VGRGMFTLFS YHPVPTEPLP IPKLNLTGRA PPRNTTVDLN SGNIDVPPNM TSWASFHNGV1140
 1141 AAGLKIAPAS QIDSAWIVYN KPKHAELANE YAGFLMALGL NGHLTKLATL NIHDYLTKGH1200
 1201 EMTSIGLLLG VSAAKLGTMD MSITRLLSIH IPALLPPTST ELDVPHNVQV AAVVGIGLVY1260
 1261 QGTAHRHTAE VLLAEIGRPP GPEMEYCTDR ESYSLAAGLA LGMVCLGHGS NLIGMSDLNV1320
 1321 PEQLYQYMVG GHRRFQAGMH REKHKSPSYQ IKEGDTINVD VTCPGATLAL AMIYLKTNNR1380
 1381 SIADWLRAPD TMYLLDFVKP EFLLLRTLAR CLILWDDILP NSKWVDSNVP QIIRENSISL1440
 1441 SEIELPCSED LNLETLSQAH VYIIAGACLS LGFRFAGSEN LSAFNCLHKF AKDFMTYLSA1500
 1501 PNASVTGPYN LETCLSVVLL SLAMVMAGSG NLKVLQLCRF LHMKTGGEMN YGFHLAHHMA1560
 1561 LGLLFLGGGR YSLSTSNSSI AALLCALYPH FPAHSTDNRY HLQALRHLYV LAAEPRLLVP1620
 1621 VDVDTNMPCY ALLEVTYKGT QWYEQTKEEL MAPTLLPELH LLKQIKVKGP RYWELLIDLS1680
 1681 KGTQHLKSIL SKDGVLYVKL RAGQLSYKED PMGWQSLLAQ TVANRNSEAR AFKPETISAF1740
 1741 TSDPALLSFA EYFCKPTVNM GQKQEILDLF SSVLYECVTQ ETPEMLPAYI AMDQAMRRLG1800
 1801 RREMSETSEL WQIKLVLEFF SSRSHQERLQ NHPKRGLFMN SEFLPVVKCT IDNTLDQWLQ1860
 1861 AGGDVCVHAY LSGQPFEESQ LSMLACFLVY HSVPAPWHLP SIGLEGSTSF AELLFKFKQL1920
 1921 KMPVRALLRL APLLLGNPQP MVM

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