YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73980711
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPIRCQQSPV LAGSAALAAM GALFLYLAKP SGYGKYSEGL TPAAPRLPAR AAWLLQELPS  60
   61 FAVPAGILAR QPRALLGQPA TVLLGLFCAH YFHRTFIYSL LTRGRPFPVV FVVRGFIFCA 120
  121 GNGLLQGYYL IYCAEYPAEW YMDVRFSLGI FLFILGMGIN IHSDYILRQL RKPGEVIYRI 180
  181 PQGGLFTYVS GANFLGEIIE WIGYALATWS LPALAFAFFS LCFLGLRAFH HHRFYLKMFE 240
  241 DYPKSRKALI PFLF

Type	Start	End	Confidence
Cytoplasmic	1	8	0.75
Transmembrane Helix	9	28	0.91
Non-Cytoplasmic	29	73	0.80
Transmembrane Helix	74	93	0.89
Cytoplasmic	94	109	0.79
Transmembrane Helix	110	130	0.92
Non-Cytoplasmic	131	143	0.84
Transmembrane Helix	144	166	0.86
Cytoplasmic	167	177	0.88
Transmembrane Helix	178	199	0.81
Non-Cytoplasmic	200	208	0.58
Transmembrane Helix	209	229	0.91
Cytoplasmic	230	254	0.97