YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73980372
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVKRGYLLL LLSVVCANRP QRLHTFLFLP GCTTGPAAAD ASPERSKPGF REHGELDFVL  60
   61 PSFLSSLPGC SCSKSVPAST TPVAPYCQKR FGGGDPKSET STCNMWYEPR RRAGHWVWGC 120
  121 LHLDGHWLVG HWPAAAMGKQ NSKLRPEVLQ DLRENTEFTD HELQEWYKGF LKDCPTGHLT 180
  181 VDEFKKIYAN FFPYGDASKF AEHVFRTFDT NGDGTIDFRE FIIALSVTSR GKLEQKLKWA 240
  241 FSMYDLDGNG YISRSEMLEI VQAIYKMVSS VMKMPEDEST PEKRTDKIFR QMDTNNDGKL 300
  301 SLEEFIKGAK SDPSIVRLLQ CDPSSASQF

Type	Start	End	Confidence
Signal Peptide	1	17	0.99
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	329	0.99