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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73979879
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKTEKSYPE RRLRGVLEEL SCGCYRFLSL ADKDQGHSSR TRLDRERLKS CMRELESMGQ  60
   61 QAKTLRAQVK KHTVRDKLRL CQNFLQKLRF LADEPQHSIP DVFIWMMSNN KRIAYARVPS 120
  121 KDLLFSIVEE ELGKDCAKVK TLFLKLPGKR GFGSAGWTVQ AKLELYLWLG LSKQRKDFLC 180
  181 GLPCGFEEVK AAQGLGLHSF PPISLVYTKK QAFQLRAHMY QARSLFAADS SGLSDPFARV 240
  241 FFINQSQCTE VLNETLCPTW DQMLVFDNLE LYGEAHELRD DPPIIVIEIY DQDAMGKADF 300
  301 MGRTFAKPLV KMADEAYCPP RFPPQLEYYQ IYRGNATAGD LLAAFELLQI GPAGKADLPP 360
  361 INGPVDMDRG PIMPVPVGIR PVLSKYRIEV LFWGLRDLKR VNLAQVDRPR VDIECAGKGV 420
  421 QSSLIHNYKK NPNFNTLVKW FEVDLPENEL LHPPLNIRVV DCRAFGRYTL VGSHAVSALR 480
  481 RFIYRPPDRS APNWNTTGEV VVNMEPEVPV KKLETMVKLD ATSDAVIKVD VADEEKEKKK 540
  541 KKKGNAEEPE EEEPDESMLD WWSKYFASID TMKEQLRQQE VSGTDLEEKE EVDNTEGLKG 600
  601 PMKVKEKAKA AKEEKKKRTQ GPGAGQGSEV PEKKKPKIDE LKVYSKELES EFDNFEDWLH 660
  661 TFNLLRGKTG DDEDGSTEEE RIVGRFKGSL CVYKVPLPED VSREAGYDPT YGMFQGIPSN 720
  721 DPINVLVRVY VVRATDLHPA DINGKADPYI AIRLGKTDIR DKENYISKQL NPVFGKSFDI 780
  781 EASFPMESML TVAVYDWDLV GTDDLIGETK IDLENRFYSK HRATCGIAQT YSIHGYNIWR 840
  841 DPMKPSQILT RLCKEGKVDG PHFGPPGRVK VSNRVFTGPS EIEDENGQRK PTEEHVALSA 900
  901 LRHWEDIPRV GCRLVPEHVE TRPLLNPDKP GIEQGRLELW VDMFPMDMPA PGTPLDISPR 960
  961 KPKKYELRVI VWNTDEVVLE DDDFFTGEKS SDIFVRGWLK GQQEDKQDTD VHYHSLTGEG1020
 1021 NFNWRYLFPF DYLAAEEKIV ISKKESMFSW DETEYKIPAR LTLQIWDADH FSADDFLGAI1080
 1081 ELDLNRFPRG AKTAKQCTME MATGEVDVPL VSIFKQKRVK GWWPLLARDE NDEFELTGKV1140
 1141 EAELHLLTAE EAEKNPVGLA RNEPDPLEKP KRPDTSFIWF LNPLKSARYF LWHTYRWLLL1200
 1201 KLLLLMLLLL LLALFLYSVP GYLVKKILGA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle