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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73979524
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVKERRPYC SLTKSRREKE RRYTNSSADN EECRVPTQKS YSSSETLKAF DHDSSRLLYG  60
   61 NRVKDLVHRE TDEYTRQGQN FTLRQLGVCE PATRRGLAFC AEMGLPHRGY SISAGSDADT 120
  121 ENEAVMSPEH AMRLWGRGVK SGRSSCLSSR SNSALTLTDT EHENKSDSEN GLPLRCSKSA 180
  181 GTRIEQHPSP PPPPPEEENE RKLLADGVLA HPLPKSQSSE NFFPLSFLGN NRKSPSSNIC 240
  241 QSDQPANNQG QPTLQPLPPP HKQHPAQHHP SITSLNRNSL TNRRNQSPAP PAALPAELQT 300
  301 TPESVQLQDS WVLGSNVPLE SRHGSRHPYL GMLTWFQGTL VFLSVFSPTR RMGVLRQGHF 360
  361 LFKTGTGTTP LFSTATPGYT MASGSVYSPP TRPLPRNTLS RSAFKFKKSS KYCSWKCTAL 420
  421 CAVGVSVLLA ILLSYFIAMH LFGLNWQLQQ TENDTFENGK VNSDTMPTNT VSLPSGDNNN 480
  481 EAPHRRNQKQ MSQGKLGGFT QENNTIDSGE LDIGRRAIQE VPPGIFWRSQ LFIDQPQFLK 540
  541 FNISLQKDAL IGVYGRKGLP PSHTQYDFVE LLDGSRLIAR EQRNLLEPER AGRQARSVNL 600
  601 HEAGFIQYLD SGIWHLAFYN DGKNAEQVSF NTIVIESVVE CPRNCHGNGE CVSGTCHCFP 660
  661 GFLGPDCSRA ACPVLCSGNG QYSKGRCLCF SGWKGTECDV PTTQCVDPQC GGRGICIMGS 720
  721 CACNSGYKGE NCEEADCLDP GCSNHGVCIH GECHCSPGWG GSNCELVKTM CPDQCSGHGT 780
  781 YLQESGSCTC DPNWTGPDCS NEICSVDCGS HGVCMGGSCR CEEGWTGAAC SQRACHPRCA 840
  841 EHGTCKDGKC ECSQGWNGEH CTIEGCPGLC NSNGRCTLDQ NGWHCVCQPG WRGAGCDVAM 900
  901 ETLCTDSKDN EGDGLVDCMD PDCCLQSSCQ NQPYCRGLPD PQDVISQSLQ SPSQQAAKSF 960
  961 YDRISFLIGS DSTHVIPGET PFNKSLASVI RGQVLTADGT PLIGVNVSFF HYPEYGYTIT1020
 1021 RQDGMFDLVA NGGASLTLVF ERSPFLTQYH TVWIPWNVFY VMDTLVMKKE ENDIPSCDLS1080
 1081 GFVRPNPIIV SSPLSTFFRS SPEDSPIIPE TQVLHEETTI PGTDLKLSYL SSRAAGYKSV1140
 1141 LKITMTQSVI PFNLMKVHLM VAVVGRLFQK WFPASPNLAY TFIWDKTDAY NQKVYGLSEA1200
 1201 VVSVGYEYES CLDLTLWEKR TAILQGYELD ASNMGGWTLD KHHVLDVQNG ILYKGNGENQ1260
 1261 FISQQPPVVS SIMGNGRRRS ISCPSCNGQA DGNKLLAPVA LACGIDGSLY VGDFNYVRRI1320
 1321 FPSGNVTSVL ELSSNPAHRY YLATDPVTGD LYVSDTNTRR IYRPKSLTGT KDLTKNAEVV1380
 1381 AGTGEQCLPF DEARCGDGGK AVEATLMSPK GMAIDKNGLI YFVDGTMIRK VDQNGIISTL1440
 1441 LGSNDLTSAR PLTCDTSMHI SQVRLEWPTD LAINPMDNSI YVLDNNVVLQ ITENRQVRIA1500
 1501 AGRPMHCQVP GVEYSVGKHA VQTTLESATA IAVSYSGVLY ITETDEKKIN RIRQVTTDGE1560
 1561 ISLVAGIPSE CDCKNDANCD CYQSGDGYAK DAKLSAPSSL AASPDGTLYI ADLGNIRIRA1620
 1621 VSKNKPFLNS MNFYEVASPT DQELYIFDIN GTHQYTVSLV TGDYLYNFSY SNDNDITAVT1680
 1681 DSNGNTLRIR RDPNRMPVRV VSPDNQVIWL TIGTNGCLKS MTAQGLELVL FTYHGNSGLL1740
 1741 ATKSDETGWT TFFDYDSEGR LTNVTFPTGV VTNLHGDMDK AITVDIESSS REEDVSITSN1800
 1801 LSSIDSFYTM VQDQLRNSYQ IGYDGSLRII YASGLDSHYQ TEPHVLAGTA NPTVAKRNMS1860
 1861 LPGENGQNLV EWRFRKEQAQ GKVNVFGRKL RVNGRNLLSV DFDRTTKTEK IYDDHRKFLL1920
 1921 RIAYDTSGHP TLWLPSSKLM AVNVTYSSTG QIASVQRGTT SEKVDYDGQG RIVSRVFADG1980
 1981 KTWSYTYLEK SMVLLLHSQR QYIFEYDMWD RLSAITMPSV ARHTMQTIRS IGYYRNIYNP2040
 2041 PESNASIITD YNEEGLLLQT AFLGTSRRVL FKYRRQTRLS EILYDSTRVS FTYDETAGVL2100
 2101 KTVNLQSDGF ICTIRYRQIG PLIDRQIFRF SEDGMVNARF DYSYDNSFRV TSMQGVINET2160
 2161 PLPIDLYQFD DISGKVEQFG KFGVIYYDIN QIISTAVMTY TKHFDAHGRI KEIQYEIFRS2220
 2221 LMYWITIQYD NMGRVTKREI KIGPFANTTK YAYEYDVDGQ LQTVYLNEKI MWRYNYDLNG2280
 2281 NLHLLNPSNS ARLTPLRYDL RDRITRLGDV QYRLDEDGFL RQRGTEIFEY SSKGLLTRVY2340
 2341 SKGSGWTVIY RYDGLGRRVS SKTSLGQHLQ FFYADLTYPT RITHVYNHSS SEITSLYYDL2400
 2401 QGHLFAMEIS SGDEFYIASD NTGTPLAVFS SNGLMLKQIQ YTAYGEIYFD SNIDFQLVIG2460
 2461 FHGGLYDPLT KLIHFGERDY DILAGRWTTP DIEIWKRIGK DPAPFNLYMF RNNNPASKIH2520
 2521 DVKDYITDVN SWLVTFGFHL HNAIPGFPVP KFDLTEPSYE LVKSQQWDDV PPIFGVQQQV2580
 2581 ARQAQAFLSL GRMAEVQVSR RRGGGAPSWL WFATVKSLIG KGVMLAVSRG RVQTNVLNIA2640
 2641 NEDCIKVAAV LNSAFYLENL HFTIEGKDTH YFIKTTTPES DLGTLRLTSG RKALENGINV2700
 2701 TVSQSTTVVN GRTRRFADVE MQFGALALHV RYGMTLDEEK ARILEQARQR ALARAWAREQ2760
 2761 QRVRDGEEGA RLWTEGEKRQ LLSAGKVQGY DGYYVLSVEQ YPELADSANN IQFLRQSEIG2820
 2821 KR

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