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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73979490
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQAHELFRYF RMPELADFRQ YVRTLPTNTL MGFGAFAAIT TFWYATRPRA LKPPCDLSMQ  60
   61 SVEVAGSDGA RRSPLLDSDE PLVYFYDDVR TIYEGFQRGI QVSNDGPCLG SRKPDQPYEW 120
  121 LSYKQVAEIA ECVGSALIQK GFKTAPDQFI GIFAQNRPEW VIIEQGCFAY SMVVVPLYDT 180
  181 LGTEAITYII NKAELSLIFV DKPDKANLLL DGVENKLIPG LKIIVLMDSY GIDLLERGKR 240
  241 CGVEIISMKA MEDLGRANRQ RPKPPAPEDL AVICFTSGTT GNPKGAMITH RNIVSDCSAF 300
  301 VKVTENIISP SPDDTLISFL PLAHMFERVV ECVMLCHGAK IGFFQGDIRL LMDDLKALQP 360
  361 TIFPVVPRLL NRMFDRIFGQ ANTTLKRWLL DFASKRKEAE LRSGIIRNNS LWDKLIFHKI 420
  421 QSSLGGKVRL MITGAAPVSA TVLTFLRAAL GCQFYEGYGQ TECTAGCCLT VPGDWTAGHV 480
  481 GSPMPCNLIK LVDVEEMNYL AAKGEGEVCV KGPNVFKGYL KDPAKTAEVL DKDGWLHTGD 540
  541 IGKWLPNGTL KIIDRKKHIF KLAQGEYIAP EKIENIYVRS EPVAQVFVHG ESLQAFLIAI 600
  601 VVPDVETLGP WARKKGLEGS FEELCRNKDV RKAVLEDMVR LGKDSGLKPF EQVKGIALHP 660
  661 ELFSIDNGLL TPTMKAKRPE LRNYFRSQID ELYSTIKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle