YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73979207
Protein type:	Globular with Signal Peptide
Type Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGGNLVRRA RERSRRGSAR PGEPWGRLFR GRVLLPKLRC FLTLPRLAAC PLGCASAALV  60
   61 PRYLVSEKMT EELDHTGQDS DADSEEVVLT PAELIEKLEQ AWMNEKFAPE LLESKSEIVE 120
  121 CVMEQLDHME ENLRRAKKGD LKVSIHRMEM ERIRYVLSSY LRCRLMKIEK FFPHILEKEK 180
  181 TPREGELSSL SPEELIFAKQ YMANTETYLK NVALKHMPPN LQVVDLLRSA VPKPDLDSYV 240
  241 FLRVKERQEN ILVEPETDEQ RDYVIDLEEG SQHLIRYKTI APLVASGAVQ LI

Type	Start	End	Confidence
Signal Peptide	1	57	0.78
N-region	1	48
H-region	49	54
C-region	55	57
Cleavage Site	57	58
Non-Cytoplasmic	58	292	0.99