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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73978822
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRRRCHHVT GSYISTASMA PKYTCFPDIL RPGPPSVISA GFSDQCWIQL LEGPSFSETA  60
   61 GTAAGGGEMA RRRWKDFTTL ELMLSVLLLM VFIITIPLFV LSAQDSLESK GLNPRTPGSC 120
  121 PEPKTDAQPL SQPDPGTVVT PDPGTASTTP NSAVCPVVDE AERINCIPDQ PPTKATCDQR 180
  181 GCCWRPQGTI NVPWCYYSRS HGYQGEGDVV KTNAGFTAQL KRLPSPSLFG NDVNNVLLTA 240
  241 EYQTSNRFHF KLTDQSKDRY EVPHEHVQPF KGDAASPLTY EVEVSKQPFS IKVIRTSNNR 300
  301 VLLDSGIGPL LFADQFLQFS TRLPSANVYG LGEQVHQQYR HDMNWKTWPI FARDTTPNGD 360
  361 GTNLYGAQTF FLCLEDASGL SFGVFLMNSN AMEVALQPTP AITYRTIGGI LDFYVFLGNT 420
  421 PEQVVQEYLE LIGRPALPSY WALGFHLSRY DYGTLESMRE VVQRNRVARL PYDVQHADID 480
  481 YMHERKDFTY DPVNYKGFPE FVKELHNNSQ KLVIIVDPAI SNNSSPSNPY GPYDRGSGAK 540
  541 IWVNASDGLT PLIGEVWPGK TVFPDYTNPS CAVWWAKEFE LFHNKIEFDG IWIDMNEVSN 600
  601 FVDGSISGCS TSHLNYPPFV PRILDGYLFS KSLCMDAVQH WGKQYDVHNL YGYSMAIATA 660
  661 EAVKTVFPNK RSFILTRSTF AGSGKFAAHW LGDNAATWND LRWSIPGMLE FNLFGIPMVG 720
  721 ADICGFALDT SEELCRRWMQ LGAFYPFSRN HNGQGYKAQD PASFGADSLL LNSSRHYLNI 780
  781 RYTLLPYLYT LFYRAHSRGD TVARPLMHEF YGDSSTWDVH QQFLWGPGLL ITPVLDEGAE 840
  841 KVMAYIPDAV WYDYETGARA RWRKQRVEMG LPADKIGLHL RGGHIFPTQQ PATTTVASRR 900
  901 NPLGLIIALD ENKEAKGELF WDDGETKDTV ANQVYLLCEF SVTQNRLDVK ILQSTYKDPN 960
  961 NLVFKEIKIL GTQEPTNVIV KHNGIPSQTS PNVTYDSNLQ VALITEIDLI LGEAYTVEWD1020
 1021 LKIRDEEKID CFPDESGASA ANCTARGCAW EASSSPGVPF CYFVNDLYSV SDVQYDSHGA1080
 1081 TATISLKSSV YASALPSVPV TSLRLRVTYH KNDMLQFKIY DPNNNRYEVP VPLNIPRVPS1140
 1141 STSESQLYDV LIKKNPFGIE IRRKSTGTVI WDSQLLGFTF NDMFIRISTR LPSQYLYGFG1200
 1201 ETEHTAFRRD LNWHTWGMFS RDQPPGYKKN SYGVHPYYMA LEEDGSAHGV LLLNSNAMDV1260
 1261 TFQPLPALTY RTIGGILDFY VFLGPTPELV TQQYTEMIGR PVMVPYWSLG FQLCRYGYQN1320
 1321 DSEIASLYDE MVAAQIPYDV QYSDIDYMER QLDFTLSPKF AGFPALITRM KANGMRVILI1380
 1381 LDPAISGNET QPYPAFTRGV EDDVFIKAPN GGGIVWGKVW PDFPDVVINA SLDWDSQVEL1440
 1441 YRAYVAFPDF FRNSTTTWWK RELQELYTNP QNPERSLKFD GMWIDMNEPA SFVNGAVPPG1500
 1501 CRDATMNHPP YMPHLESRDK GLSSKTLCME SEQVLPDGSR VRHYDVHSLY GWAQTRPTYE1560
 1561 AVQEVTGQRG IVITRSTFPS SGRWGGHWLG DNTAAWDQLK KSIIGMMEFS LFGISYTGAD1620
 1621 ICGFFQDAEY EMCVRWMQLG AFYPFSRNHN TIGTRRQDPV SWNATFEDIS RSVLQTRYTL1680
 1681 LPYLYTLMHL AHTEGSTVVR PLLHEFVSDR VTWNVDSQFL LGPAFLVSPV LEPNARNVTA1740
 1741 YFPRARWYDY YTGVDIGARA EWKSLPAPLD HINLHVRGGY ILPWQEPAQN THLSRQKFIG1800
 1801 FKVALDDEGA AKGWLFWDDG QSIDTYGKGH YYLANFSASQ NMMQSHIVFN KYITDANPLK1860
 1861 LGYVEIWGVG SVSISSVSIS VSGMVITPTF TYNPATQVLS IDVTGRDISL HNFISLTWRS1920
 1921 TLNF

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