YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57097397
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTFIFLALL GATVAFPIDD DDKIVGGYTC SRNSVPYQVS LNSGYHFCGG SLINSQWVVS  60
   61 AAHCYKSRIQ VRLGEYNIAV SEGGEQFINA AKIIRHPRYN ANTIDNDIML IKLSSPATLN 120
  121 SRVSAIALPK SCPAAGTQCL ISGWGNTQSI GQNYPDVLQC LKAPILSDSV CRNAYPGQIS 180
  181 SNMMCLGYME GGKDSCQGDS GGPVVCNGEL QGVVSWGAGC AQKGKPGVYT RVCKYVSWIQ 240
  241 QTIAAN

Type	Start	End	Confidence
Signal Peptide	1	17	0.95
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	246	0.99