YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|84579081
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSATRRACQ LLLLHSLFPV PRMGNSASSI VSPQEALPGR KEQTPVAAKH HVNGNRTVEP  60
   61 FPEGTQMAVF GMGCFWGAER KFWVLKGVYS TQVGFAGGYT SNPTYKEVCS EKTGHAEVVR 120
  121 VVYQPEHISF EELLKVFWEN HDPTQGMRQG NDHGTQYRSA IYPTSAKQME AALSSKEDYQ 180
  181 KVLSEHGFGP ITTDIREGQI FYYAEDYHQQ YLSKNPNGYC GLGGTGVSCP MGIKK

Type	Start	End	Confidence
Signal Peptide	1	26	0.97
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	235	0.99