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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73978215
Protein type: Transmembrane
Type Confidence: 0.70
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFQVSKMRV LAYSVFALQG LEMYIINVSA AFGLPYRLPP ADSQSSGLAA GSWGADRRAE  60
   61 GLPRAMPEVV DSCSLASPAS VCRTKHLHLR CSVDFPRRVL TGTAALTVQS QEDNLRSLTL 120
  121 DTKDLTIEKV VTNGQEVKYT LGERQSYKGS PMEISLPIAL SKNQEVVIEI SFETSPKSSA 180
  181 LQWLTPEQTS GKEHPYLFSQ CQAIHCRAIL PCQDTPSVKL TYSAEVSVPK ELVALMSAIR 240
  241 DGEEPDPEDP SRKIYKFSQK VPIPCYLIAL VVGALESRQI GPRTLVWSEK EQVEKSAYEF 300
  301 SETESMLKIA EDLGGPYVWG QYDLLVLPPS FPYGGMENPC LTFVTPTLLA GDKSLSNVIA 360
  361 HEISHSWTGN LVTNKTWDHF WLNEGHTVYL ERHICGRLFG EKFRHFHALG GWGELQNSIK 420
  421 TFGDTHPYTK LVVDLTNVDP DVAYSSVPYE KGFALLFYLE QLLGGPEVFL GFLKAYVEKF 480
  481 SYKSITTDDW KDFLYSHFKD KVDILNQVDW NAWLYSPGMP PVKPNYDMTL TNACIALSQR 540
  541 WITAKEEDLN SFTAADLKDL SSHQLNEFLA QMLQKAPLPL GHIKRMQEVY NLNAINNSEI 600
  601 RFRWLRLCIQ SKWEEAIPLA LKMATEQGRM KFTRPLFKDL AAFDKSHHQA VCTYQEHRAS 660
  661 MHPVTAMLVG KDLKVD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle