YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73977794
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKMLSFKLL LLAVALGFFE GDAKFGERSE GSGARRRRCL NGNPPKRLKR RDRRLMSQLE  60
   61 LLSGGEVLCG GFYPRLSCCL RSDSPGLGRL DTKIFSMTNN TECGKLLEEI KCALCSPYSQ 120
  121 SLFHSPEREA LERDLVLPLL CKDYCKEFFY TCRSHIPGFI QTTAEEFCFY YARKDGGLCF 180
  181 PDFPRKQIRG PASNYLDQME EYDKVEEISR KHKHNCFCIQ EVVSGLRQPV GALHSGDGSH 240
  241 RLFILEKEGY VKILTPEGEI FKEPYLDIHK LVQSGIKGGD ERGLLSLAFH PNYKKNGKLY 300
  301 VSYTTNQERW AIGPHDHILR VVEYTVSRKN PHQVDLRTAR VFLEVAELHR KHLGGQLLFG 360
  361 PEGFLYVILG DGMITLDDME EMDGLSDFTG SVLRLDVDTD MCNVPYSIPR SNPHFNSTNQ 420
  421 PPEVFAHGLH DPGRCAVDRH PTDININLTI LCSDSNGKNR SSARILQIIK GKDYESEPSL 480
  481 LEFKPFSNGP LVGGFVYRGC QSERLYGSYV FGDRNGNFLT LQQSPVSKQW QEKPLCLGNS 540
  541 GSCRGYFSGH ILGLGKDKLG EVYILSSSKS MTQTHNGKLY KIVDPKRPLM PEECRATVQP 600
  601 AQVLTSECSR LCRNGYCTPT GKCCCTPGWE GDFCRIAKCE PVCRHGGVCV RPNKCLCKKG 660
  661 YLGPQCEQVD RNIRRVTRAG ILDQIIDMTS YLLDLTSYIV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle