YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73977476
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASGLMSCLA ARLGIAEPEV LRKAEEYLRL SQVKCAGLSA RTTETSSAVM CLDLAASCGK  60
   61 CPLDRAYLIK LSGLNKKMYQ SCLKSFECLL GLKSSIGIRD LAVQFSCTEA VNMASKILQS 120
  121 YKSSLPQTQQ LDLDLSRPLF TTAALLSACK ILKLKVDKNK MVATSGVKKA VFDRLCKQLE 180
  181 KIGQQADREA GDSATPPKKK KKTMAETPAR ETEKIVESPC KLQKDEDLTQ DYEEWKRKIL 240
  241 ENAAKAQKAT AE

Type	Start	End	Confidence
Signal Peptide	1	16	0.84
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	252	0.99