YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73977219
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGLALLYSG VFVAFWACMV VVGICYTIFD LGFRFDVAWF LTETSPFMWS NLGIGLAISL  60
   61 SVVGAAWGIY ITGSSIIGGG VKAPRIKTKN LVSIIFCEAV AIYGIIMAIV ISNMAEVRRT 120
  121 RVPFSATDPQ AIGHRNYHAG YSMFGAGLTV GLSNLFCGVC VGIVGSGAAL ADAQNPSLFV 180
  181 KILIVEIFGS AIGLFGVIVA ILQTSRVKMG D

Type	Start	End	Confidence
Cytoplasmic	1	6	0.75
Transmembrane Helix	7	30	0.88
Non-Cytoplasmic	31	48	0.72
Transmembrane Helix	49	71	0.89
Cytoplasmic	72	90	0.66
Transmembrane Helix	91	112	0.92
Non-Cytoplasmic	113	145	0.72
Transmembrane Helix	146	170	0.86
Cytoplasmic	171	178	0.70
Transmembrane Helix	179	202	0.89
Non-Cytoplasmic	203	211	0.71