YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73976488
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHACAVRRW RLRRVRSGSE LRPLPATLTT PAVNAVFGAC ASLSLFGVPY AAAGVESCRC  60
   61 AALAVAMVKL SKEAKQRLQQ LFKGGQFAIR WGFIPLVIYL GFKRGADPGM PEPTVLSLLW 120
  121 G

Type	Start	End	Confidence
Cytoplasmic	1	20	0.78
Transmembrane Helix	21	41	0.76
Non-Cytoplasmic	42	49	0.57
Transmembrane Helix	50	70	0.65
Cytoplasmic	71	86	0.65
Transmembrane Helix	87	106	0.64
Non-Cytoplasmic	107	121	0.85