YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73976299
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFTASPKPQ LSSRANAFSI AALMSSGGSK EKEAAENTIK PLEQFVEKSS CAQPLGELTS  60
   61 LDAHGEFGGG GSSSSPSSSS LCTEPLIPTT PIIPSEEMAK IACSLETKEL WDKFHELGTE 120
  121 MIITKSGRRM FPTIRVSFSG VDPDAKYIVL MDIVPVDNKR YRYAYHRSSW LVAGKADPPL 180
  181 PARLYVHPDS PFTGEQLLKQ MVSFEKVKLT NNELDQHGHI ILNSMHKYQP RVHIIKKKDH 240
  241 TASLLNLKSE EFRTFIFPET VFTAVTAYQN QLITKLKIDS NPFAKGFRDS SRLTDIERES 300
  301 VESLIQKHSY ARSPIRTYGG EEDVLGEEVQ TTQNRGSAFT TSDNLSLSSW VSSSSSFPGF 360
  361 QHPQSLTALG TSTASIATPI PHPIQGSLPP YSRLGMPLTP SAIASSMQGS GPTFPSFHMP 420
  421 RYHHYFQQGP YAAIQGLRHS SAVMTPFV

Type	Start	End	Confidence
Signal Peptide	1	28	0.66
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	448	0.98