YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73975845
Protein type:	Globular with Signal Peptide
Type Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASKSWVNFL TFLCGSAIGF VLCSQLFSIL LGEQNDAQPN ILHNDPHARH SDDNGQNHLE  60
   61 GQMNFNADSS QHKDENTDIA ENLYQKVKIL CWVMTGPQNL EKKAKHVKAT WAQRCNKVLF 120
  121 MSSEENKDFP AVGLKTREGR DQLYWKTIKA FQYVHDHYLE DADWFMKADD DTYVILDNLR 180
  181 WLLSKYNPEE PIYFGRRFKP YVRQGYMSGG AGYVLSKEAL RRFVDAFKTD KCTHSSSIED 240
  241 LALGRCMEII NVEAGDSRDT TGKETFHPFV PEHHLIKGYL PRTFWYWNYN YYPPVEGPGC 300
  301 CSDLAVSFHY VDPTTMYELE YLVYHLRPYG YLYRYQPALP ENILKEKSRA YKNEDPKVQ

Type	Start	End	Confidence
Signal Peptide	1	23	0.76
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	359	0.98