YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73975403
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLVRAPPPH PDPRRDGEVR ERSAARQEAA FRPRALRAFQ GRMTLGRPRH APARCETRGS  60
   61 PHLAPPGWAR GWRLDLLGRN AFPPKCLDRG VLHPAQLVSG AHSGQLCGSS GRRRSKRTCA 120
  121 PALRLEASRF PPESPPAAPG FHLLHAVLST TVIPSCMPGE SEDNCTALVQ IEDNPRVAQV 180
  181 SIIKCGSDMN GYCLHGQCIY LVDMSQTYCR CEVGYTGVRC EHFYLTVQQP LSKEYVALTV 240
  241 ILIILFLIIV AGSLYYFCRW YRNRKSKEPK QEYKRVTSGD PALPQV

Type	Start	End	Confidence
Non-Cytoplasmic	1	234	0.98
Transmembrane Helix	235	258	0.94
Cytoplasmic	259	286	0.98