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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73975291, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.81
Topology Confidence: 0.12
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESKALLAIA LWLCVETGAA SGGLPSVSLH PPRLSIQKDI LTIMANTTLQ ITCRGQRDLD  60
   61 WLWPNNQSGS EKRVEVTECS DSFFCKMLTI PKVMGNDTGA YKCFYRDTDM ASVIYVYVQD 120
  121 YRSPFIASVS DQHGVVYITE NKNKTVVIPC LGSISNLNVS LCARYPEKRF VPDGNRISWD 180
  181 SKKGFTIPSY MISYAGMVFC EAKINDESYQ SIMYIVVVVG YKIYDVILSP PHGVELSVGE 240
  241 RLVLNCTVRT ELNVGLDFNW EYPSLKHQHK KLVNRDLKTQ SGSEMKKFLS TLTIDGVTRS 300
  301 DQGWYTCAAS SGLMTKRNST FIRVHEKPFV AFGSGMESSV EATVGDRVRI PVKYLGYPPP 360
  361 EIKWYKNGRP IESNHTIKVG HVLTIMEVSE KDTGNYTVIL TNPISKEKQS HVISLVVNVP 420
  421 PQIGEKSLIS PVDSYQYGTT QSLTCTVYAV PPPHHIRWYW QLEECAYKPA QAVLMTNPYT 480
  481 CKEWRNVDDF QGGNKIEVNK NQFALIEGKN KTVSTLVIQA ANVSALYKCE AVNKVGRGER 540
  541 VISFHVIRGP EITLQPDTQP TEQESVSLWC TADRTTFENL TWYKSGPQAL AVHAGEVPTP 600
  601 VCKNLDALWR MNATTFSNGT SDILILELQN VSLQDQGDYV CFAQDRKTKK RHCVVRQLTV 660
  661 LERVAPMITG NLENQTTSIG ETIEVSCTTS GNPPPQITWF KDNETLVEDS GIILKDGNRN 720
  721 LTIRRVRKED EGLYTCQACS VLGCAKVEAF FIVEGAQEKT NLEVIILVGT AVIAMFFWLL 780
  781 LVIVLRTVKR ANGGELKTGY LSIVMDPDEL PLDEHCERLP YDASKWEFPR DRLKLGKPLG 840
  841 RGAFGQVIEA DAFGIDKTAT CKTVAVKMLK EGATHSEHRA LMSELKILIH IGHHLNVVNL 900
  901 LGACTKPGGP LMVIVEFCKF GNLSTYLRSK RNEFVPYKTK GARFRQGKEY VGEITMDPKR 960
  961 RLDSITSSQS SASSGFVEEK SLSDVEEEEV SEDLYKNFLT LEHLICYSFQ VAKGMEFLAS1020
 1021 RKCIHRDLAA RNILLSEKNV VKICDFGLAR DIYKDPDYVR KGDARLPLKW MAPETIFDRV1080
 1081 YTIQSDVWSF GVLLWEIFSL GASPYPGVKI DEEFCRRLKE GTRMRAPDYT TPEMYQTMLD1140
 1141 CWHGEPNQRP TFSELVEHLG NLLQANAQQD GKDYIVLPIS ETLSMEEDSG LSLPTSPVSC1200
 1201 MEEEEVCDPK FHYDNTAGIS QYLQNSKRKS RPVSVKTFED IPLEEPEVKV IPDDNQTDSG1260
 1261 MVLASEELKT LEDRTKLAPS FSGLMPSKSK ESVASEGSNQ TSGYQSGYHS DDTDTTVYSS1320
 1321 EEAELLKLME IGPQAGSAAQ ILQPDSGPTL SSPPV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle