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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73974944
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKAAGTQED GRHRRTRFFL FLDGSGKECT CRMQKISSTI LEFYPLSTHR QLLSVSEMEQ  60
   61 QGKISWEGWD FSKNLGSKEI LLRKSKTDIA SIFSTWGNSG LSSRTEWQNL VTLRSSSHVI 120
  121 CCGHPYLRAL SPVKSYSTNV QKEGQGSQTL RVEKVPSFDE TAENIGAELK APLIKQEPLQ 180
  181 VRVKAVLKKR EYGPKYTQNN FITGVRAINE FCLKSSDLEQ LRKIRRRSPH EDTESFTVYL 240
  241 RSDVEAKSLE VWGSPEALAR EKKLRKEAEI EYRERLFRNQ KILREYRDFL GNTKPRSRTT 300
  301 SVFFKGPGKV VMVAICINGL NCFFKFLAWI YTGSASMFSE AIHSLSDTCN QGLLAVGISK 360
  361 SVQTPDPTHP YGFSNMRYIA SLISGVGIFM MGAGLSWYHG IMGLLNPQPM ESLLWAYCIL 420
  421 AGSLASEGAT LLVAVNELRR SARAKGMSFY KYVMESRDPS TNVILLEDTA AVLGVTIAAT 480
  481 CMGLTSITGN PLYDSLGSLG VGTLLGVVSA FLIYTNTEAL LGRSIQPEQV QRLTELLEND 540
  541 PSVRAIHDVK ATDLGLGKVR FKAEVDFDGR VVTRSYLEKQ DFDQMLQEIQ EVKTPEELET 600
  601 FMLKHGENII DTLGAEVDRL EKELKKRNPE VRHVDLEIL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle