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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73974926
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAVQPPGCL SALRTHEDHA ELVRHPGRLP HGCWTPSLWA AGRGRPGDRV IPRNGQVLHS  60
   61 SRWEGQVGLG SAHERARITQ SVPRDVGGPG LPGARFLLPG ALRASAVTAQ RAQVPPQAAP 120
  121 AALPPLRRCP RGAPGARVQE PPSCWRGRRP EARGPGAAHV KQPPARAPPA PVPARMHADR 180
  181 RASGLHPASE RGGLAEPSLV AKHEDSLFKD LFQDYERWVR PVEHLNDKIK IKFGLALSQL 240
  241 VDVDEKNQLM TTNVWLKQEW TDVKLRWRPG DYGGIKVIRV PSDSLWTPDI VLFDNADGRF 300
  301 EGTSTKAVVR YDGTVTWTPP ANYKSSCTID VTFFPFDVQN CSMKFGSWTY DGSQVDIILE 360
  361 DQDVDKRDFF DNGEWEIVSA TGSRGNRTDS ACWYPYVTYS FVIKRLPLFY TLFLIIPCIG 420
  421 LSFLTVLVFY LPSNEGEKIC LCTSVLVSLT VFLLVIEEII PSSSKVIPLI GEYLVFTMIF 480
  481 VTLSIMVTVF AINIHHRSSS THDAMAPWVR KIFLHKLPKV LCMRSHADRY FAQAGTGGAG 540
  541 SPGAPRNTLE AALDSIRYIT RHVRKENDVR EVVEDWKFIA QVLDRMFLWT FLLVSVVGSL 600
  601 GLFVPVIYKW ANIIVPVHIG DANK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle