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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73973969
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.39
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEGRGKEAS ALLGRAADPG AARGGDGSGG GGGGVSVRVA WGRGGEAAAA AAAAASELRH  60
   61 TGPGRWGPGR RAAGSWRRRR RAERGGGGGA MAGQQFQYDD SGNTFFYFLT SFVGLIVIPA 120
  121 TYYLWPRDQN AEQIRLKNIR KVYGRCMWYR LRLLKPQPNI IPTVKKIVLL AGWALFLFLA 180
  181 YKVSKTDREY QEYNPYEVLN LDPGATVAEI KKQYRLLSLK YHPDKGGDEV MFMRIAKAYA 240
  241 ALTDEESRKN WEEFGNPDGP QATSFGIALP AWIVDQKNSI LVLLVYGLAF MVILPVVVGS 300
  301 WWYRSIRYSG DQILIRTTQI YTYFVYKTRN MDMKRLIMVL AGASEFDPQY NKDATSRPTD 360
  361 NILIPQLIRE IGSINLKKNE PPLTCPYSLK ARVLLLSHLA RMKIPETLEE DQQFMLKKCP 420
  421 ALLQEMVNVI CQLIIMARSR EEREFRAPTL ASLENCMKLS QMAVQGLQQF KSPLLQLPHI 480
  481 EEDNLRRVSN HKKYKIKTIQ DLVSLKESDR HSLLHFLEDE KYEEVMAVLG SFPYVTMDIK 540
  541 SQVLDDEDSN NITVGSLVTV LVKLTRQTMA EVFEKEQSIC AAEEQPAEDG QGDTNKNRTK 600
  601 GGWQQKSKGP KKTAKSKKKK PLKKKPTPVP LPQSKQQKQK QANGIVGSEA TVKEDEEEVS 660
  661 DKGSDSEEEE TNRESQSEKD DGSDRDSDRE QDEKQNKDDE AEWQELQQSI QRKERALLET 720
  721 KSKITHPVYS LYFPEEKQEW WWLYIADRKE QTLISMPYHV CTLKDTEEVE LKFPAPGKPG 780
  781 NYQYTVFLRS DSYMGLDQIK PLKLEVHEAK PVPENHPQWD TAIEGDEDQE DSEGFEDSFE 840
  841 EEEEEEEDDD 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle