YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73973739
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTESTWSSTW SLYVGPLLWT LPFPQALGAP DWKLCLESWP QGGEDGPRKA LGEAKPRGLA  60
   61 PLRPPGSGTL LWNVEAGPRF GSSLEISHPA ALHFRLPGVP AQSLVPRARA DAALVPSTPK 120
  121 AKSFRCGETF VRWESAARTR REVTCESRAG GPGGRSASDS ARGRGLPWAA PPSARLPAPW 180
  181 PGDSVGPSLV GSVTGFEARR MGTLPGRKDI PPWVKVPADL KDPEVLQVQT QLLEAMFGPA 240
  241 GSRIPYIEQV SKVMLELKVL ESSGLTEVLV YGSYLYKLRA KWMLQSMAEW HRQRRERGML 300
  301 KLEDAMKALQ LGPWMK

Type	Start	End	Confidence
Signal Peptide	1	28	0.94
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	316	0.99