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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73972801
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPQWGIMKL PLDPDLVSLP SRRRGLSDQT METLLGGLLA FGMAFAVVDA CPKYCVCQNL  60
   61 SESLGTLCPS KGLLFVPPDI DRRTVELRLG GNFIIHIGRQ DFANMTGLVD LTLSRNTISH 120
  121 IQPFSFLDLE SLRSLHLDSN RLPSLGEDTL RGLVNLQHLI VNNNQLGGIA DEAFEDFLLT 180
  181 LEDLDLSYNN LHGLPWGSVR RMVNLHQLSL DHNLLDHIAE GTFADLQKLA RLDLTSNRLQ 240
  241 KLPPDPIFAR SQASALTATP FAPALSFSFG GNPLHCNCEL LWLRRLERDD DLETCGSPGG 300
  301 LKGRYFWHVR EEEFVCEPPL ITQHTHKLLV LEGQAATLKC KAIGDPSPLI HWVAPDDRLV 360
  361 GNSSRTAVYD NGTLDILITT SQDSGAFTCI AANAAGEATA MVEVSIIQLP HLSNSTSRTA 420
  421 PPKSRLSDIT GSSKTSRGGG GSGGGEPPKS PPERAVLVSD VTTTSALVKW SVSKSAPRVK 480
  481 MYQLQYNCSD DEVLIYRMIP ASNKAFVVNN LVSGTGYDLC VLAMWDDTAT TLTATNIVGC 540
  541 AQFFTKADYP QCQSMHSQIL GGTMILVIGG IIVATLLVFI VILMVRYKVC NQEAPGKLAA 600
  601 AAVSNVHSQT NGAPPPALAS APSGAPVQGP PKVVVRNELV QFSASLARGS DSSSSSSLGS 660
  661 GEAAGLGRGP WRLPPPAPRP KPNLDRLMGA FASLDLKSQR KEELLDSRTP GGRGSGTSAR 720
  721 GHHSDREPLL GPPAARARSL LPLPLEGKAK RSHSFDMGDF AAAAAAAGGV APGGYSPPRR 780
  781 VSNIWTKRSL SVNGMLLPFE ESDLVGARGT FGSSEWVMES TV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle