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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73972308
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSTLMPQLC LISLVLGLLS GGGSATPLSE ARPQGPCPLE GVQIKGGSFR LLKEGQALEY  60
   61 LCPSGFYPYP VQARTCRSTG SWSTLQTQDK MVVKKAECRA IRCPRPQEFE NGDYWPRASY 120
  121 YNVSDEISFR CYDGFTLRGS ANRTCQATGR WDGQTAICDD GAGYCPNPGI PIGTRKVGIN 180
  181 YRLEDRVTYY CSRGLTLRGS QQRTCQEGGS WSGTEPSCQD SFMYDTPEEV AEAFLSSLTE 240
  241 TIEGVDAEDG HIPGEQQKRK IVLDPSGSMN IYLVLDGSDS IGAGNFTRAK NCLRDFIEKV 300
  301 ASYGVKPKYG LVTYATNPKV WVRVRDKNSS DADWVTKILN QVSYEDHMLK SGTNTKKALE 360
  361 AVYSMMNWPG ETPPADWNRT RHVIILMTDG LYNMGGDPVS VIHNIRNFLD IGRDHKNPRE 420
  421 DYLDVYVFGV GPLVNQENIN ALASKKDKEQ HVFKVKDMEN LEDVFIQMLD ETRTLGLCGM 480
  481 VWEHKKGTDY HKQPWHAKIS ITRPSKGHET CMGAVVSEYF VLTAAHCFTE NDQKHSIKVS 540
  541 VGGKKELEIK EVLVHPNYNI NGKKEKDILE FYDYDVALIE LEKKLEYDQT LRPICLPCTQ 600
  601 ATNQALRLPP STTCQQQMEE LLPAKDIKAL FVSELSKDRR KVLVRKEVYI KNGDKKASCE 660
  661 KDAQYASGYE KIKDISEVVT PRFLCTGGVN PYADPNTCKG DSGGPLIIHK KSRFIQVGVI 720
  721 SWGVVDVCKD RRRWQQVPTH ARDFHVNLFQ VMPWLKEKLK NEDLEFL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle