YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73972043
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSASLPHPL AAFPDRSVAQ KPLTPTAVTY LPCPPSRCPH YSPSTGLGPC GWILVAVSFL  60
   61 FTVITFPVSV WMCIKIIKEY ERAIIFRLGR ILQGGAKGPG LFFILPCTDS FIKVDMRTIS 120
  121 FDIPPQEILT KDSVTISVDG VVYYRVQNAT LAVANITNAD SATRLLAQTT LRNVLGTKNL 180
  181 SQILSDREEI AHNMQCTLDD ATDDWGIKVE RVEIKDVKLP VQLQRAMAAE AEASREARAK 240
  241 VIAAEGEMNA SRALKEASMV ITESPAALQL RYLQTLTTIA AEKNSTIVFP LPIDMLQGIV 300
  301 GAKK

Type	Start	End	Confidence
Non-Cytoplasmic	1	50	0.84
Transmembrane Helix	51	74	0.87
Cytoplasmic	75	304	0.53