YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57094253
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTWSYVRENS SWTAFPFLFW KRLSLDLLRL KLSKEALTNH QVTSYSSADS TFPAKVDHSH  60
   61 HKGTSHMAYN STTVPSHHHP TTSASHSHGE GMHNMMMHMT FYFGFKNVEL LFSGLVINTA 120
  121 GEMAGAFVAV FLLAMFYEGL KIARESLLRK SQVSIRYNSM PVPGPNGTIL METHKTVGQQ 180
  181 MLSFPHLLQT VLHIIQVVIS YFLMLIFMTY NGYLCIAVAA GAGTGYFLFS WKKAVVVDIT 240
  241 EHCH

Type	Start	End	Confidence
Cytoplasmic	1	97	0.76
Transmembrane Helix	98	117	0.59
Non-Cytoplasmic	118	119	0.47
Transmembrane Helix	120	140	0.80
Cytoplasmic	141	185	0.73
Transmembrane Helix	186	205	0.74
Non-Cytoplasmic	206	209	0.44
Transmembrane Helix	210	230	0.82
Cytoplasmic	231	244	0.68