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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73971795
Protein type: Transmembrane
Type Confidence: 0.76
Topology Confidence: 0.10
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGKLGSLKV VVMLEGNGAP AGIGVHELWG ARPEGGGWRA LPAPGDRKNI RRRPGRAALQ  60
   61 RRRAGARGEE VSAFRPPGRQ PSAKNEHYRT LVRTGPSAPK LGEFVVTLHG HFNWTARAAL 120
  121 LYLDARTDDR PHYFTIEGVF EALQGSNLSV QHQVYAREPG GPEQATHFIR ANGRIVYICG 180
  181 PLEMLHEILL QAQRENLTNG DYVFFYLDVF GESLRAGPTR STGRPWQDNR TREQAQALRE 240
  241 AFQTVLVITY REPPNPEYQE FQNRLLIRAR EDFGVELAPS LMNLIAGCFY DGILLYAEVL 300
  301 NETIQEGGTR EDGLRIVEKM QGRRYHGVTG LVVMDKNNDR ETDFVLWAMG DLDSGDFQPA 360
  361 AHYSGAEKQI WWTGRPIPWV KGTPPLDNPP CAFDLDDPSC DKTPLSTLAI VALGTGITFI 420
  421 MFGVSSFLIF RKLMLEKELA SMLWRIRWEE LQFGNSERYH KGAGSRLTLS LRGSSYGSLM 480
  481 TAHGKYQIFA NTGHFKGNVV AIKHVNKKRI ELTRQVLFEL KHMRDVQFNH LTRFIGACID 540
  541 PPNICIVTEY CPRGSLQDIL ENDSINLDWM FRYSLINDLV KGMAFLHNSI IASHGSLKSS 600
  601 NCVVDSRFVL KITDYGLASF RSTAEPDDSH ALYAKKLWTA PELLSGNPLP TTGMQKADVY 660
  661 SFGIILQEIA LRSGPFYLEG LDLSPKEIVQ KVRNSQRPYF RPSIDRTQLN EELVLLMERC 720
  721 WAQEPAERPD FGQIKGFIRR FNKEGGTSIL DNLLLRMEQY ANNLEKLVEE RTQAYLEEKR 780
  781 KAEALLYQIL PHSVAEQLKR GETVQAEAFD SVTIYFSDIV GFTALSAEST PMQVVTLLND 840
  841 LYTCFDAIID NFDVYKVETI GDAYMVVSGL PGRNGQRHAP EIARMALALL DAVSSFRIRH 900
  901 RPHDQLRLRI GVHTGPVCAG VVGLKMPRYC LFGDTVNTAS RMESNGQALK IHVSSTTKDA 960
  961 LDELGCFQLE LRGDVEMKGK GKMRTYWLLG ERKGPAGLL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle