YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73971741
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRRKAPIGA SRLFFRVFRA AFRGRSASRA GRGGKARNSA PTAGWSTSAG LAERGGARRP  60
   61 RGDRERLGPR RRAPRPGREP RQSVLPAERG PPPSQRSSAR GAARGHAGST RGAAAGARRS 120
  121 RVKKVRPRSA RSEDVARSQE VTRSEEVAQS EEVTEGQEVA PSEEMAAAGL SVTVTHSNEK 180
  181 HDLHVTPQQG CSEPIVQDLA QVVEEATGVP LPFQKLIFKG KSLKEMEKPL SALGIQNGCR 240
  241 VMLIGKKNSP EEEIELKKLK DLEKSVEKIA DQLEGLNKEL TGIQQGFLAK DLQAEALCKL 300
  301 DKRVKATIEQ FMKILEEIDT LILPENFKDS RLKRKGLVKR VQAFLAECDT VEQNICQETE 360
  361 RLQSTNLALA E

Type	Start	End	Confidence
Signal Peptide	1	52	0.70
N-region	1	43
H-region	44	49
C-region	50	52
Cleavage Site	52	53
Non-Cytoplasmic	53	371	0.99