YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73971508
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASQGLPPSR MALLGMLLGL LMASCFTFCL SHQNPWVTPC VFLSLKEFAL TSPEKSSTKE  60
   61 AERKDTTAEE ELDSEVLEVF HPTYEWQALR PGQAVPVGSH VRLNLQTGAR EVKLQEEDKY 120
  121 RNNLKGLRKG KRLDINTNTY TSQDLKSALA KFKEGAEVES SKEDKARQAK VKRLFRPIEE 180
  181 LKKDFEELNV VIETDMQIMV RLINKFNSSS SSLEEKIAAL FDLEYYVHQM DNAQDLLSFG 240
  241 GLQVVINGLN STEPLVKEYA AFVLGAAFSS NPKVQVEAIE GGALQKLLVI LATEQPLTAK 300
  301 KKVLFALCSL LRHFPYAQQQ FLKLGGLQVL RSLVQAKGTE VLAVRVVTLL YDLVTEKMFA 360
  361 EEEAELTQES SPEKLQQYRQ VHLLPGLREQ GWCEITAHLL ALPEHDAREK VLQTLGALLA 420
  421 TCRDRYHQDP QLSRMLVSLQ AEYQALAALE LRDGEDEGYF RELLGSINSL LKELR

Type	Start	End	Confidence
Signal Peptide	1	31	0.94
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	475	0.99