YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73971208
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKRTVLSCP SPAAPPLQAR GAFRSFPHFW GEDFLASLMF KIQLEPLKLR AWTLNGFVKF  60
   61 RNKETSAGPV AVMGKDYYKI LGIPSGANED EIKKAYRKMA LKYHPDKNKE PNAEEKFKEI 120
  121 AEAYDVLSDP KKRGLYDQYG EEGLKTGGGS SGGSSGSFHY TFHGDPHATF ASFFGGSNPF 180
  181 DIFFASSRST RPFSGFDPDD MDVDEDEDPF GAFGRFGFNG LSRGPRRPPE PLYPRRKVQD 240
  241 PPVVHELRVS LEEIYHGSTK RMKITRRRLN PDGRTVRTED KILHIVIKRG WKEGTKITFP 300
  301 KEGDATPDNI PADIVFVLKD KPHAHFRRDG TNVLYSALIS LKEALCGCTV NIPTIDGRVI 360
  361 PLPCNDVIKP GTVKRLRGEG LPFPKVPTQR GDLIVEFKVR FPDRLTPQTR QILKQHLPCS 420
  421

Type	Start	End	Confidence
Signal Peptide	1	21	0.95
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	420	0.99