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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73971056
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLHSTAEET GILHDPGHAA SRLLLHGVIE VWTHPPHLRG SVSGYANLPR QAGRRPPQRR  60
   61 LRGNPASPPR LRPGAAQALT AGSGAGRRGE PTSPGGAPRR AAPEAPAGPT GKPPASPTGA 120
  121 RGRGCGRQLE RRHGYHTPRV KRPPSPACSI SRDLAGSAPV RETPADGKAS GESGPGKGSE 180
  181 EAKGRFRVNF VDPAASSSAD ESLSDAAGVA GDGPNVSFQN GGDTVLSEGS SLHSGGGGGS 240
  241 GGGSGHHQHY YYDTHTNTYY LRTFGHNTMD AVPRIDHYRH TAAQLGEKLL RPSLAELHDE 300
  301 LEKEPFEDGF ANGEESTPTR DAVVTYTAES KGVVKFGWIK GVLVRCMLNI WGVMLFIRLS 360
  361 WIVGQAGIGL SVVVIIMATV VTTITGLSTS AIATNGFVRG GGAYYLISRS LGPEFGGAIG 420
  421 LIFAFANAVA VAMYVVGFAE TVVELLKEHS ILMIDEINDI RIIGAITVVI LLGISVAGME 480
  481 WEAKAQIVLL VILLLAIADF VIGTFIPLDS KKPKGFFGYK SEIFNENFGP DFREEETFFS 540
  541 VFAIFFPAAT GILAGANISG DLADPQSAIP KGTLLAILIT TVVYIGIAVS VGSCVVRDAT 600
  601 GNVNDTIVTE LTNCTSAACK LNFDFSSCES NPCYYGLMNN FQVMSMVSGF APLISAGIFS 660
  661 ATLSSALASL VSAPKIFQAL CKDNIYPAFQ MFAKGYGKNN EPLRGYILTF LIALGFILIA 720
  721 ELNVIAPIIS NFFLASYALI NFSVFHASLA KSPGWRPAFK YYNMWISLLG AILCCIVMFV 780
  781 INWWAALLTY VIVLGLYIYV TYKKPDVNWG SSTQALTYLN ALQHSIRLSG VEDHVKNFRP 840
  841 QCLVMTGAPN SRPALLHLVH DFTKNVGLMI CSHVHMGPRR QAMKEMSIDQ AKYQRWLIKN 900
  901 KMKAFYAPVH ADDLREGAQY LMQAAGLGRM KPNTLVLGFK KDWLQADMRD VDMYINIFHD 960
  961 AFDIQYGVVV IRLKEGLDIS HLQGQEELLS SQEKSPGVKD VVLSMEYSKK SDLDTSKPSD1020
 1021 EKSVTHKDEE EDGKTPTQPL LKKESKGPAV PLNVADQKLL EASTQFQKKQ GKNTIDVWWL1080
 1081 FDDGGLTLLI PYLLTTKKKW KDCKIRVFIG GKINRIDHDR RAMATLLSKF RIDFSDIMVL1140
 1141 GDINTKPKKE NIVAFDEMIE PYRLHEDDKE QDIADKMKED EPWRITDNEL ELYKTKTYRQ1200
 1201 IRLNELLKEH SSTANIIVMS LPVARKGAVS SALYMAWLEA LSKDLPPILL VRGNHQSVLT1260
 1261 FYS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle