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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73970462
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRTEKRAPG RLRLPASRLS PALPLLALFG PRKPPSRDGV WAGASERKSS AVQPGYPVGL  60
   61 SCAGAVAPGG LAAAAKNVSG LGVLRVSGAV RRWELAVAAG PGTGRQGERA RDVPRLRRAR 120
  121 AEGRPPRESQ PRVRRMLYRE LMLENYGTLV SLGKDICWGS VVVPSPRRTI GGLVQVHPTG 180
  181 ILFSKPKVIF QLQQGEDPWM VENGVSQSPC VGWENLFETT VSEEENQEVM NKLLGDSFFD 240
  241 FKLGKAYINE NKLEKQQGKK NKPFRKVLVT IKNTYMRERS FTSIELGKNL NLKPSLIRKP 300
  301 RLITRGRKPH SQHYSVLFKQ LGVNTVRKCY KCNICGKIFL HSSSLSKHQR IHTGEKLYKC 360
  361 KECRKAFSQS SSLTQHLRVH TGEKPYICSE CGKAFSFTTS LIGHQRMHTG ERPYKCNECG 420
  421 KTFKGSSSLN NHQRIHTGEK PYKCNECGRA FSQCSSLIQH HRIHTGEKPY ECSQCGKAFT 480
  481 SISRLSRHHR IHTGEKPFNC NECGKVFSYH SALIIHQRIH TGEKPYVCKE CGKAFSQSSA 540
  541 LIQHQRIHTG EKPYKCNECG KAFSWISRLN IHNRIHTGEK PYNCKECGKA FSSHSAVNTH 600
  601 RKIHTGEKPY KCNDCEKAFN QSSALIQHQR IHTGEKPFNC KVCGKAFRQS SSLMTHMRIH 660
  661 TGEKPYKCKD CGKAFSQSSS LTNHQRTHSG EKPYICNECG KSFNQSLHLI EHQRIHTGEK 720
  721 PYRCSECEKT FSHRSSLLAH QRIHTGEKPY KCNECEKAFS SSSTLIKHLR VHTGEKPYQC 780
  781 KECGKAFSQC STLTVHQRIH TGEKLYKCTE CEKAFNCRAK LQRHQRIHTG EKPYKCSECG 840
  841 KGYSQFASLA EHQRLHTGEQ LCKCLECGRT FTRISTLTEH QRIHMDQKPY QCTECGKTFN 900
  901 QYSSFNEHRK IHTGEKLYSC EECGKAFGCK SNLYRHQRIH TGEKPYQCNQ CGKAFSQYSF 960
  961 LTEHERIHTG EKLYKCLECG KAYSYRSNLC RHKKVHNKEK LYKWKEYGKP FIYSSSLTQY1020
 1021 QRFLRGDKAS EV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle