YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73970281
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVPGERRAAR FCDALSEGGP PAPPARLSPP SAAGLYYLAE LIEEYTVATS RIIKYMIWFS  60
   61 TAVLIGLYVF ERFPTFMIGV GLFTNLVYFG LLQTFPFIML TSPNFILSCG LVVVNHYLAF 120
  121 QFFAEEYYPF SEVWAYFTFC LWIIPFAFFV SLSAGENVLP STMQPGDDVV SNYFTKGKRG 180
  181 KRLGILVVFS FIKEAILPSR QKIY

Type	Start	End	Confidence
Cytoplasmic	1	51	0.92
Transmembrane Helix	52	70	0.80
Non-Cytoplasmic	71	74	0.51
Transmembrane Helix	75	95	0.62
Cytoplasmic	96	96	0.29
Transmembrane Helix	97	124	0.73
Non-Cytoplasmic	125	132	0.50
Transmembrane Helix	133	155	0.90
Cytoplasmic	156	204	0.52