YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|220690413, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRRSRTKK ATLLSHTRPP TVRAKHATLS SKATRNLIRG HHRLLKNRAQ ALKANDDLLV  60
   61 ERIDARIREN GGLEGYQLAS RLGQSLERGG DSSKVLVDWL SPQLSRLQDT KSKLRVLEVG 120
  121 ALSTKNACSM NNFLDVTRID LNSQEPGILR QDFMEMSLPR GAADQFHIIS LSLVLNYVPD 180
  181 AIGRGEMLKR CVAFLRKSPL SGSPFHISPR LFLVLPVACV KNSRYLTECR LRDIMSSMGF 240
  241 VLEKSKETSR LIFQLWEHSH DFQPTSFKKE VLRTGKMKNN FAIVVKQ

Type	Start	End	Confidence
Signal Peptide	1	24	0.91
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	287	0.99