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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|83764769
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVFRPRGRS DSRVSGLPFR RSPFVDDEAP DAIEPPVEQA NNGSPPRTPL GIESLVSGGT  60
   61 SHRTPSRSFY HRSFNSTADP ARYSSQGLRE QTAELASYAL SLNGSSLPEE RNTLPPSLDI 120
  121 FHPIQDTDLS SSPADTVVTE ALDTEPPTGP IASSSALTEM IRNPSDSLDG VNGRGSAPKW 180
  181 SGLGEGGASV GISGTASGMH EAPSTEQTSL LPKSPHTKPF RSYGITEDVE SQDTIRERKQ 240
  241 NAFHKMLSSC MICFQGLLHP KSWNGRTVWE QGVIYPFSLL PSVFLGLLLN ILDALSYGMI 300
  301 LFPLGEPIFS DLGSDGISMF YVSTIIAQLV FSCGGSIFRG GVGSEMIEVV PFFHQMAFTI 360
  361 LARVGQDNPR SVIATTILAF SASSVLTGLV FFLMGTCKLG SLIGFFPRHI LIGCIGGVGF 420
  421 FLLMTGVEVS ARLPGSLEIT IPTLEKLSRP DTVPLWLVPL LLAIGLLVLK RFVRSNFLVG 480
  481 GYFIAVAVIF YIVKLSAKVP MDTLRKSGWV FEAPSSNNPW WHFYTLYDFA AVDWAAFLDT 540
  541 IPAMFALTFF GVLHVPINVP ALGISTGEDN LNVDRELMAH GVTNALSGFS GSIQNYLVYT 600
  601 NSLLFIDSGG NSRLAGIMLA AATLGILLVG PVIVGFIPVM VVGALIFLLG IELMEEALVD 660
  661 TWGKLQRHEY MTVVIIVVTM GAWDFVVGIF VGIILACMSF VVQTSRKSAI RATFSGKIAG 720
  721 STVRRPPIQQ RFLREAGQQT LIIKLGGYLF FGTIVDVENT MRGLIEEEAF NKRPIRFIIL 780
  781 DFSRVYGIDF SAAEAFTRIN RILRKRNVLM TISGLNTGGD VGRSLQNVGL FESENGVQIF 840
  841 EDFNSALEFC ENDYLKVFYS HREALLKRKD TSSTFLEVPG SHTQHHLHES IVSSPRHRHL 900
  901 QQAATTTLRE DETAVVPPTA WASMRQPLPL LLQTFQGLTS RNEDFWFRAC TYFVRDTYAA 960
  961 GTVLFQEGDV PNGFYLLESG MLRAEYEMPQ GRYFELIVAG RPCGELPFFS ETRRTATVKA1020
 1021 EQDCVAWRLT TAKWRDLRER EPEIARELLT VSLKLTTERM DSITSYVLTM AA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle