YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73969864
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERPQPDRQA PGAGRGARGA GRGVRALSPG WAAPARRREA PSPSSFGFGL RGGRVSVCMP  60
   61 QDLSEALKEA TKEVHTQAEN AEFMKNFQKG QVTRKGFKLV MASLYHVYEA LEEEIEHNRE 120
  121 NPVYAPLYFP EELHRKAALE RDMAFWYGPR WHEAIPYTQA TRRYVQRLQE VGRREPELLV 180
  181 AHAYTRYLGD LSGGQVLKKI AQKALDLPSS GEGVDFFTFP NIASATKFKQ LYRSRMNSLE 240
  241 MTPEVRQRVI EEAKTAFLLN IQLFEELQEL LSKDTEDQSP SQASGLRQRV GSRAQDSTPA 300
  301 ETPRGKPQLN LPSQAPLLRW VLTLSFLVAT VAVGLYVM

Type	Start	End	Confidence
Non-Cytoplasmic	1	316	0.72
Transmembrane Helix	317	337	0.90
Cytoplasmic	338	338	0.67