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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73969710
Protein type: Transmembrane
Type Confidence: 0.60
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKEMSANTML DSQRQQKHYG ITSPISLACP KEIDHIYTQK LIDAMKPFGV FEDEEELNHR  60
   61 LVVLGKLNNL VKEWISDVSE SKNLPPSVVA TVGGKIFTFG SYRLGVHTKG ADIDALCVAP 120
  121 RHVERSDFFQ SFFEKLKHQD GIRNLRAVED AFVPVIKFEF DGIEIDLVFA RLAIQTISDN 180
  181 LDLRDDSRLR SLDIRCIRSL NGCRVTNEIL HLVPNKETFR LTLRAVKLWA KRRGIYSNML 240
  241 GFLGGVSWAM LVARTCQLYP NAAASTLVHK FFLVFSKWEW PNPVLLKQPE ESNLNLPVWD 300
  301 PRVNPSDRYH LMPIITPAYP QQNSTYNVST STRTVMVEEF KQGLAVTDEI LQGKSDWSKL 360
  361 LEPPNFFQKY RHYIVLTASA STEENHLEWV GLVESKIRVL VGNLERNEFI TLAHVNPQSF 420
  421 PGNKEHHKDN NYVSMWFLGI IFRRVENAES VNIDLTYDIQ SFTDTVYRQA NNINMLKEGM 480
  481 KIEATHVKKK QLHHYLPAEI LQKKKKQSLS DVSRSSSGPQ SKRSSLDSNC LDSSRDTDNG 540
  541 TPFNSPVSIN KPSKPDLPPS GETERNNAEP TAVVVEKPLS VPPAQGLSIP VIGAKVDSAV 600
  601 KAVSPPAVCT IPTVVGRNVI PRIPTPHNPT QGQPHLNGMA TKNVTHKRSH SPSIDGSSKR 660
  661 LKDIEKDAIG ECMPIPTIDT SRKKRLPSKE LPDSSSPVPA NNIRVIKNSI RLTLNR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle