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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73969598
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLPAAGSLV EGQLAPRVQI LCPTYQQEAR PVTRVVYLLV PVFLQERRAN RTKTPAPAGG  60
   61 HEPSPSPPGS PRADYSLPLQ LGLRPGGFDS PRAPLPWAIV RRAVAPQPPA AFQASGPRLA 120
  121 AHTYTLGHAR AGRPHSRSAV VRGSHCLLRR PARWPRPAPP LPARPGPLAE RGSRDSDAGR 180
  181 GRARAAQRAS DAHGPARSSR GSRLSSGGRS PSYLVMSRRS QRLTRYSQGD DDGGSSSGGS 240
  241 SVMGSQSTLF KDSPLRTLKR KSSNMKRLSP APQLGPSSDA HTSYYSESVV RESYFGSPRA 300
  301 ASLARSSILD DHLHGDPYWS EDLRVRRRRG TGGTESSKLN GLAEDKSSED FLGSSSGYSS 360
  361 EDDFAGYSET DHRSSGSRLR NAVSWAASCF WMVVTSPGRL FGLLYWWVGT TWYRLTTAAS 420
  421 LLDVFVLTRR FSSVKTFLWF LLLLLLMTGL TYGAWYFYPY GLQTFHPALV SWWAAKGSSR 480
  481 QHDVWESRDA SHFQTEQRIL SRIHSLERRL EALAAEFSSN WQKEAMRLER LELRQGATGG 540
  541 GGHVGLSQED TLALLEGLVS RREAALKEDF RRDTAARIQE ELVTLRAEHQ QDLEDLFKKI 600
  601 VQASQESEAR LQQLKSEWQR MTQESFRENS MKELGRLEGQ LTGLRQELAA LSLKQSSVAD 660
  661 QVGLLPQQLQ AVRDDVESQF PAWVSQFLLR GGGTRTGLLQ REEMQAQLQE LENKILAHVA 720
  721 EMQGKSAREA AASLGLTLQK EGVIGVTEEQ VQRIVNQALK RYSEDRIGMV DYALESGGAS 780
  781 VISTRCSETY ETKTALLSLF GIPLWYHSQS PRVILQPDVH PGNCWAFQGP QGFAVVRLSA 840
  841 RIRPTAVTLE HVPKSLSPNS TISSAPKDFS IFGFDEDLQQ EGTLLGQFTY DQDGEPIQTF 900
  901 YFQDTKMATY QVVELRILTN WGHPEYTCIY RFRVHGEPTY 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle