YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73969329
Protein type:	Globular with Signal Peptide
Type Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPCVSCYA ALSCRLFLGG RVSLSQKQGV WKAAAAELQT GTGSQILRLR HTTGVSTKKN  60
   61 VAALRRETYT VDFIKKQIEE FNIGKRHLAN MMGEDPETFT QEDIDKAIAY LFPSGLFEKQ 120
  121 ARPIMKHPEQ IFPKQRAIQW GEDGRPFHFL FYTGKQAYYS LMHEAYGKLL EVEKRQNQLQ 180
  181 AKGLFSEKTK TKDLIDSRWL IKEELEEMLV EKLSDQDYAQ FIRLLERLLT LHCGSEEEFV 240
  241 QRFRRSVTIQ SKKQLIEPVQ YDEQGMAFST SEGKRKSAKA EAIVYGHGSG RIKVNGIDYL 300
  301 LYFPVTQDRE QLMFPFHFLD RLGKHDTTCT VSGGGRSSQA GAIRLAVARA LCSFVTEEEV 360
  361 EWMRQAGLLT ADPRVKERKK PGQEGARRKF TWKKR

Type	Start	End	Confidence
Signal Peptide	1	25	0.69
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	395	0.99